Gene : Thecc1EG015920 T. cacao v1.1

Defline:  (1 of 7) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  2443
Name:  ? Thecc1EG015920 Secondary Identifier:  ? PAC:27448592

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015920 0.5kb upstream 0.5kb upstream 4974 true scaffold_3: 30339565-30344538 Theobroma cacao
Thecc1EG015920 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30344039-30344538 Theobroma cacao
Thecc1EG015920 0.5kb downstream 0.5kb downstream 4974 true scaffold_3: 30339065-30344038 Theobroma cacao
Thecc1EG015920 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30339065-30339564 Theobroma cacao
Thecc1EG015920 1.0kb upstream 1.0kb upstream 5474 true scaffold_3: 30339565-30345038 Theobroma cacao
Thecc1EG015920 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30344039-30345038 Theobroma cacao
Thecc1EG015920 1.0kb downstream 1.0kb downstream 5474 true scaffold_3: 30338565-30344038 Theobroma cacao
Thecc1EG015920 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30338565-30339564 Theobroma cacao
Thecc1EG015920 2.0kb upstream 2.0kb upstream 6474 true scaffold_3: 30339565-30346038 Theobroma cacao
Thecc1EG015920 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30344039-30346038 Theobroma cacao
Thecc1EG015920 2.0kb downstream 2.0kb downstream 6474 true scaffold_3: 30337565-30344038 Theobroma cacao
Thecc1EG015920 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30337565-30339564 Theobroma cacao
Thecc1EG015920 5.0kb upstream 5.0kb upstream 9474 true scaffold_3: 30339565-30349038 Theobroma cacao
Thecc1EG015920 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30344039-30349038 Theobroma cacao
Thecc1EG015920 5.0kb downstream 5.0kb downstream 9474 true scaffold_3: 30334565-30344038 Theobroma cacao
Thecc1EG015920 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30334565-30339564 Theobroma cacao
Thecc1EG015920 10.0kb upstream 10.0kb upstream 14474 true scaffold_3: 30339565-30354038 Theobroma cacao
Thecc1EG015920 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30344039-30354038 Theobroma cacao
Thecc1EG015920 10.0kb downstream 10.0kb downstream 14474 true scaffold_3: 30329565-30344038 Theobroma cacao
Thecc1EG015920 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30329565-30339564 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829917 5264 Brassicales-Malvales View MSA
124349371 5266 SBM View MSA
124253644 5268 Malvidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain