Gene : Thecc1EG015909 T. cacao v1.1
Defline:  RING/U-box superfamily protein Genomic Order:  2434
Name:  ? Thecc1EG015909 Secondary Identifier:  ? PAC:27450605
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015909 0.5kb upstream 0.5kb upstream 2568 true scaffold_3: 30258811-30261378 Theobroma cacao
Thecc1EG015909 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30258811-30259310 Theobroma cacao
Thecc1EG015909 0.5kb downstream 0.5kb downstream 2568 true scaffold_3: 30259311-30261878 Theobroma cacao
Thecc1EG015909 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30261379-30261878 Theobroma cacao
Thecc1EG015909 1.0kb upstream 1.0kb upstream 3068 true scaffold_3: 30258311-30261378 Theobroma cacao
Thecc1EG015909 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30258311-30259310 Theobroma cacao
Thecc1EG015909 1.0kb downstream 1.0kb downstream 3068 true scaffold_3: 30259311-30262378 Theobroma cacao
Thecc1EG015909 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30261379-30262378 Theobroma cacao
Thecc1EG015909 2.0kb upstream 2.0kb upstream 4068 true scaffold_3: 30257311-30261378 Theobroma cacao
Thecc1EG015909 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30257311-30259310 Theobroma cacao
Thecc1EG015909 2.0kb downstream 2.0kb downstream 4068 true scaffold_3: 30259311-30263378 Theobroma cacao
Thecc1EG015909 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30261379-30263378 Theobroma cacao
Thecc1EG015909 5.0kb upstream 5.0kb upstream 7068 true scaffold_3: 30254311-30261378 Theobroma cacao
Thecc1EG015909 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30254311-30259310 Theobroma cacao
Thecc1EG015909 5.0kb downstream 5.0kb downstream 7068 true scaffold_3: 30259311-30266378 Theobroma cacao
Thecc1EG015909 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30261379-30266378 Theobroma cacao
Thecc1EG015909 10.0kb upstream 10.0kb upstream 12068 true scaffold_3: 30249311-30261378 Theobroma cacao
Thecc1EG015909 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30249311-30259310 Theobroma cacao
Thecc1EG015909 10.0kb downstream 10.0kb downstream 12068 true scaffold_3: 30259311-30271378 Theobroma cacao
Thecc1EG015909 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30261379-30271378 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818636 5264 Brassicales-Malvales Singleton cluster - no MSA
124348146 5266 SBM View MSA
124253517 5268 Malvidae View MSA
124073839 5270 Rosid View MSA
123744072 5271 Pentapetalae View MSA
122770892 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain