Gene : Thecc1EG016182 T. cacao v1.1
Defline:  (1 of 1) K14795 - ribosomal RNA-processing protein 36 (RRP36) Genomic Order:  2681
Name:  ? Thecc1EG016182 Secondary Identifier:  ? PAC:27450305
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016182 0.5kb upstream 0.5kb upstream 4066 true scaffold_3: 31706158-31710223 Theobroma cacao
Thecc1EG016182 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31706158-31706657 Theobroma cacao
Thecc1EG016182 0.5kb downstream 0.5kb downstream 4066 true scaffold_3: 31706658-31710723 Theobroma cacao
Thecc1EG016182 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31710224-31710723 Theobroma cacao
Thecc1EG016182 1.0kb upstream 1.0kb upstream 4566 true scaffold_3: 31705658-31710223 Theobroma cacao
Thecc1EG016182 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31705658-31706657 Theobroma cacao
Thecc1EG016182 1.0kb downstream 1.0kb downstream 4566 true scaffold_3: 31706658-31711223 Theobroma cacao
Thecc1EG016182 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31710224-31711223 Theobroma cacao
Thecc1EG016182 2.0kb upstream 2.0kb upstream 5566 true scaffold_3: 31704658-31710223 Theobroma cacao
Thecc1EG016182 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31704658-31706657 Theobroma cacao
Thecc1EG016182 2.0kb downstream 2.0kb downstream 5566 true scaffold_3: 31706658-31712223 Theobroma cacao
Thecc1EG016182 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31710224-31712223 Theobroma cacao
Thecc1EG016182 5.0kb upstream 5.0kb upstream 8566 true scaffold_3: 31701658-31710223 Theobroma cacao
Thecc1EG016182 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31701658-31706657 Theobroma cacao
Thecc1EG016182 5.0kb downstream 5.0kb downstream 8566 true scaffold_3: 31706658-31715223 Theobroma cacao
Thecc1EG016182 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31710224-31715223 Theobroma cacao
Thecc1EG016182 10.0kb upstream 10.0kb upstream 13566 true scaffold_3: 31696658-31710223 Theobroma cacao
Thecc1EG016182 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31696658-31706657 Theobroma cacao
Thecc1EG016182 10.0kb downstream 10.0kb downstream 13566 true scaffold_3: 31706658-31720223 Theobroma cacao
Thecc1EG016182 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31710224-31720223 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833149 5264 Brassicales-Malvales View MSA
124338544 5266 SBM View MSA
124244037 5268 Malvidae View MSA
124065033 5270 Rosid View MSA
123748708 5271 Pentapetalae View MSA
122790262 5272 Eudicot View MSA
122043218 5273 Angiosperm View MSA
121347730 5274 Embryophyte View MSA
123428667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain