Gene : Thecc1EG016187 T. cacao v1.1
Defline:  (1 of 2) PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Genomic Order:  2685
Name:  ? Thecc1EG016187 Secondary Identifier:  ? PAC:27450069
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016187 0.5kb upstream 0.5kb upstream 5347 true scaffold_3: 31732740-31738086 Theobroma cacao
Thecc1EG016187 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31737587-31738086 Theobroma cacao
Thecc1EG016187 0.5kb downstream 0.5kb downstream 5347 true scaffold_3: 31732240-31737586 Theobroma cacao
Thecc1EG016187 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31732240-31732739 Theobroma cacao
Thecc1EG016187 1.0kb upstream 1.0kb upstream 5847 true scaffold_3: 31732740-31738586 Theobroma cacao
Thecc1EG016187 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31737587-31738586 Theobroma cacao
Thecc1EG016187 1.0kb downstream 1.0kb downstream 5847 true scaffold_3: 31731740-31737586 Theobroma cacao
Thecc1EG016187 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31731740-31732739 Theobroma cacao
Thecc1EG016187 2.0kb upstream 2.0kb upstream 6847 true scaffold_3: 31732740-31739586 Theobroma cacao
Thecc1EG016187 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31737587-31739586 Theobroma cacao
Thecc1EG016187 2.0kb downstream 2.0kb downstream 6847 true scaffold_3: 31730740-31737586 Theobroma cacao
Thecc1EG016187 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31730740-31732739 Theobroma cacao
Thecc1EG016187 5.0kb upstream 5.0kb upstream 9847 true scaffold_3: 31732740-31742586 Theobroma cacao
Thecc1EG016187 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31737587-31742586 Theobroma cacao
Thecc1EG016187 5.0kb downstream 5.0kb downstream 9847 true scaffold_3: 31727740-31737586 Theobroma cacao
Thecc1EG016187 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31727740-31732739 Theobroma cacao
Thecc1EG016187 10.0kb upstream 10.0kb upstream 14847 true scaffold_3: 31732740-31747586 Theobroma cacao
Thecc1EG016187 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31737587-31747586 Theobroma cacao
Thecc1EG016187 10.0kb downstream 10.0kb downstream 14847 true scaffold_3: 31722740-31737586 Theobroma cacao
Thecc1EG016187 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31722740-31732739 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837595 5264 Brassicales-Malvales View MSA
124337673 5266 SBM View MSA
124240759 5268 Malvidae View MSA
124064254 5270 Rosid View MSA
123737041 5271 Pentapetalae View MSA
122785711 5272 Eudicot View MSA
122043295 5273 Angiosperm View MSA
121350840 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain