Gene : Thecc1EG016153 T. cacao v1.1
Defline:  (1 of 1) PTHR18896//PTHR18896:SF15 - PHOSPHOLIPASE D // SUBFAMILY NOT NAMED Genomic Order:  2653
Name:  ? Thecc1EG016153 Secondary Identifier:  ? PAC:27449580
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPASYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3561 Theobroma cacao pathologic  
Tcacao PWY-7039 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016153 0.5kb upstream 0.5kb upstream 7368 true scaffold_3: 31542412-31549779 Theobroma cacao
Thecc1EG016153 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31542412-31542911 Theobroma cacao
Thecc1EG016153 0.5kb downstream 0.5kb downstream 7368 true scaffold_3: 31542912-31550279 Theobroma cacao
Thecc1EG016153 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31549780-31550279 Theobroma cacao
Thecc1EG016153 1.0kb upstream 1.0kb upstream 7868 true scaffold_3: 31541912-31549779 Theobroma cacao
Thecc1EG016153 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31541912-31542911 Theobroma cacao
Thecc1EG016153 1.0kb downstream 1.0kb downstream 7868 true scaffold_3: 31542912-31550779 Theobroma cacao
Thecc1EG016153 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31549780-31550779 Theobroma cacao
Thecc1EG016153 2.0kb upstream 2.0kb upstream 8868 true scaffold_3: 31540912-31549779 Theobroma cacao
Thecc1EG016153 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31540912-31542911 Theobroma cacao
Thecc1EG016153 2.0kb downstream 2.0kb downstream 8868 true scaffold_3: 31542912-31551779 Theobroma cacao
Thecc1EG016153 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31549780-31551779 Theobroma cacao
Thecc1EG016153 5.0kb upstream 5.0kb upstream 11868 true scaffold_3: 31537912-31549779 Theobroma cacao
Thecc1EG016153 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31537912-31542911 Theobroma cacao
Thecc1EG016153 5.0kb downstream 5.0kb downstream 11868 true scaffold_3: 31542912-31554779 Theobroma cacao
Thecc1EG016153 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31549780-31554779 Theobroma cacao
Thecc1EG016153 10.0kb upstream 10.0kb upstream 16868 true scaffold_3: 31532912-31549779 Theobroma cacao
Thecc1EG016153 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31532912-31542911 Theobroma cacao
Thecc1EG016153 10.0kb downstream 10.0kb downstream 16868 true scaffold_3: 31542912-31559779 Theobroma cacao
Thecc1EG016153 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31549780-31559779 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838904 5264 Brassicales-Malvales View MSA
124342671 5266 SBM View MSA
124247063 5268 Malvidae View MSA
124072300 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain