Gene : Thecc1EG016142 T. cacao v1.1
Defline:  (1 of 1) PTHR31867:SF2 - EXPANSIN-A18-RELATED Genomic Order:  2645
Name:  ? Thecc1EG016142 Secondary Identifier:  ? PAC:27450518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016142 0.5kb upstream 0.5kb upstream 2809 true scaffold_3: 31483383-31486191 Theobroma cacao
Thecc1EG016142 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31483383-31483882 Theobroma cacao
Thecc1EG016142 0.5kb downstream 0.5kb downstream 2809 true scaffold_3: 31483883-31486691 Theobroma cacao
Thecc1EG016142 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31486192-31486691 Theobroma cacao
Thecc1EG016142 1.0kb upstream 1.0kb upstream 3309 true scaffold_3: 31482883-31486191 Theobroma cacao
Thecc1EG016142 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31482883-31483882 Theobroma cacao
Thecc1EG016142 1.0kb downstream 1.0kb downstream 3309 true scaffold_3: 31483883-31487191 Theobroma cacao
Thecc1EG016142 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31486192-31487191 Theobroma cacao
Thecc1EG016142 2.0kb upstream 2.0kb upstream 4309 true scaffold_3: 31481883-31486191 Theobroma cacao
Thecc1EG016142 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31481883-31483882 Theobroma cacao
Thecc1EG016142 2.0kb downstream 2.0kb downstream 4309 true scaffold_3: 31483883-31488191 Theobroma cacao
Thecc1EG016142 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31486192-31488191 Theobroma cacao
Thecc1EG016142 5.0kb upstream 5.0kb upstream 7309 true scaffold_3: 31478883-31486191 Theobroma cacao
Thecc1EG016142 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31478883-31483882 Theobroma cacao
Thecc1EG016142 5.0kb downstream 5.0kb downstream 7309 true scaffold_3: 31483883-31491191 Theobroma cacao
Thecc1EG016142 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31486192-31491191 Theobroma cacao
Thecc1EG016142 10.0kb upstream 10.0kb upstream 12309 true scaffold_3: 31473883-31486191 Theobroma cacao
Thecc1EG016142 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31473883-31483882 Theobroma cacao
Thecc1EG016142 10.0kb downstream 10.0kb downstream 12309 true scaffold_3: 31483883-31496191 Theobroma cacao
Thecc1EG016142 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31486192-31496191 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835466 5264 Brassicales-Malvales View MSA
124351238 5266 SBM View MSA
124241883 5268 Malvidae View MSA
124063240 5270 Rosid View MSA
123741692 5271 Pentapetalae View MSA
122790140 5272 Eudicot View MSA
122043429 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310122 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain