Gene : Thecc1EG016134 T. cacao v1.1
Defline:  (1 of 5) PTHR13935//PTHR13935:SF54 - ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED // TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  2637
Name:  ? Thecc1EG016134 Secondary Identifier:  ? PAC:27449517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016134 0.5kb upstream 0.5kb upstream 1741 true scaffold_3: 31444906-31446646 Theobroma cacao
Thecc1EG016134 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31444906-31445405 Theobroma cacao
Thecc1EG016134 0.5kb downstream 0.5kb downstream 1741 true scaffold_3: 31445406-31447146 Theobroma cacao
Thecc1EG016134 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31446647-31447146 Theobroma cacao
Thecc1EG016134 1.0kb upstream 1.0kb upstream 2241 true scaffold_3: 31444406-31446646 Theobroma cacao
Thecc1EG016134 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31444406-31445405 Theobroma cacao
Thecc1EG016134 1.0kb downstream 1.0kb downstream 2241 true scaffold_3: 31445406-31447646 Theobroma cacao
Thecc1EG016134 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31446647-31447646 Theobroma cacao
Thecc1EG016134 2.0kb upstream 2.0kb upstream 3241 true scaffold_3: 31443406-31446646 Theobroma cacao
Thecc1EG016134 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31443406-31445405 Theobroma cacao
Thecc1EG016134 2.0kb downstream 2.0kb downstream 3241 true scaffold_3: 31445406-31448646 Theobroma cacao
Thecc1EG016134 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31446647-31448646 Theobroma cacao
Thecc1EG016134 5.0kb upstream 5.0kb upstream 6241 true scaffold_3: 31440406-31446646 Theobroma cacao
Thecc1EG016134 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31440406-31445405 Theobroma cacao
Thecc1EG016134 5.0kb downstream 5.0kb downstream 6241 true scaffold_3: 31445406-31451646 Theobroma cacao
Thecc1EG016134 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31446647-31451646 Theobroma cacao
Thecc1EG016134 10.0kb upstream 10.0kb upstream 11241 true scaffold_3: 31435406-31446646 Theobroma cacao
Thecc1EG016134 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31435406-31445405 Theobroma cacao
Thecc1EG016134 10.0kb downstream 10.0kb downstream 11241 true scaffold_3: 31445406-31456646 Theobroma cacao
Thecc1EG016134 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31446647-31456646 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837803 5264 Brassicales-Malvales View MSA
124351097 5266 SBM View MSA
124249323 5268 Malvidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain