Gene : Thecc1EG016135 T. cacao v1.1
Defline:  (1 of 3) PTHR10996:SF131 - GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 Genomic Order:  2638
Name:  ? Thecc1EG016135 Secondary Identifier:  ? PAC:27447273
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016135 0.5kb upstream 0.5kb upstream 4012 true scaffold_3: 31458585-31462596 Theobroma cacao
Thecc1EG016135 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31458585-31459084 Theobroma cacao
Thecc1EG016135 0.5kb downstream 0.5kb downstream 4012 true scaffold_3: 31459085-31463096 Theobroma cacao
Thecc1EG016135 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31462597-31463096 Theobroma cacao
Thecc1EG016135 1.0kb upstream 1.0kb upstream 4512 true scaffold_3: 31458085-31462596 Theobroma cacao
Thecc1EG016135 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31458085-31459084 Theobroma cacao
Thecc1EG016135 1.0kb downstream 1.0kb downstream 4512 true scaffold_3: 31459085-31463596 Theobroma cacao
Thecc1EG016135 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31462597-31463596 Theobroma cacao
Thecc1EG016135 2.0kb upstream 2.0kb upstream 5512 true scaffold_3: 31457085-31462596 Theobroma cacao
Thecc1EG016135 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31457085-31459084 Theobroma cacao
Thecc1EG016135 2.0kb downstream 2.0kb downstream 5512 true scaffold_3: 31459085-31464596 Theobroma cacao
Thecc1EG016135 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31462597-31464596 Theobroma cacao
Thecc1EG016135 5.0kb upstream 5.0kb upstream 8512 true scaffold_3: 31454085-31462596 Theobroma cacao
Thecc1EG016135 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31454085-31459084 Theobroma cacao
Thecc1EG016135 5.0kb downstream 5.0kb downstream 8512 true scaffold_3: 31459085-31467596 Theobroma cacao
Thecc1EG016135 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31462597-31467596 Theobroma cacao
Thecc1EG016135 10.0kb upstream 10.0kb upstream 13512 true scaffold_3: 31449085-31462596 Theobroma cacao
Thecc1EG016135 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31449085-31459084 Theobroma cacao
Thecc1EG016135 10.0kb downstream 10.0kb downstream 13512 true scaffold_3: 31459085-31472596 Theobroma cacao
Thecc1EG016135 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31462597-31472596 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818030 5264 Brassicales-Malvales Singleton cluster - no MSA
124314357 5266 SBM Singleton cluster - no MSA
124163363 5268 Malvidae Singleton cluster - no MSA
124074287 5270 Rosid View MSA
123747917 5271 Pentapetalae View MSA
122795795 5272 Eudicot View MSA
122049787 5273 Angiosperm View MSA
121349350 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain