Gene : Thecc1EG016126 T. cacao v1.1
Defline:  (1 of 1) K04569 - copper chaperone for superoxide dismutase (CCS) Genomic Order:  2630
Name:  ? Thecc1EG016126 Secondary Identifier:  ? PAC:27450690
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016126 0.5kb upstream 0.5kb upstream 3660 true scaffold_3: 31415613-31419272 Theobroma cacao
Thecc1EG016126 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31418773-31419272 Theobroma cacao
Thecc1EG016126 0.5kb downstream 0.5kb downstream 3660 true scaffold_3: 31415113-31418772 Theobroma cacao
Thecc1EG016126 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31415113-31415612 Theobroma cacao
Thecc1EG016126 1.0kb upstream 1.0kb upstream 4160 true scaffold_3: 31415613-31419772 Theobroma cacao
Thecc1EG016126 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31418773-31419772 Theobroma cacao
Thecc1EG016126 1.0kb downstream 1.0kb downstream 4160 true scaffold_3: 31414613-31418772 Theobroma cacao
Thecc1EG016126 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31414613-31415612 Theobroma cacao
Thecc1EG016126 2.0kb upstream 2.0kb upstream 5160 true scaffold_3: 31415613-31420772 Theobroma cacao
Thecc1EG016126 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31418773-31420772 Theobroma cacao
Thecc1EG016126 2.0kb downstream 2.0kb downstream 5160 true scaffold_3: 31413613-31418772 Theobroma cacao
Thecc1EG016126 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31413613-31415612 Theobroma cacao
Thecc1EG016126 5.0kb upstream 5.0kb upstream 8160 true scaffold_3: 31415613-31423772 Theobroma cacao
Thecc1EG016126 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31418773-31423772 Theobroma cacao
Thecc1EG016126 5.0kb downstream 5.0kb downstream 8160 true scaffold_3: 31410613-31418772 Theobroma cacao
Thecc1EG016126 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31410613-31415612 Theobroma cacao
Thecc1EG016126 10.0kb upstream 10.0kb upstream 13160 true scaffold_3: 31415613-31428772 Theobroma cacao
Thecc1EG016126 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31418773-31428772 Theobroma cacao
Thecc1EG016126 10.0kb downstream 10.0kb downstream 13160 true scaffold_3: 31405613-31418772 Theobroma cacao
Thecc1EG016126 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31405613-31415612 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832400 5264 Brassicales-Malvales View MSA
124346051 5266 SBM View MSA
124241702 5268 Malvidae View MSA
124062271 5270 Rosid View MSA
123739046 5271 Pentapetalae View MSA
122793199 5272 Eudicot View MSA
122046170 5273 Angiosperm View MSA
121346754 5274 Embryophyte View MSA
123425336 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain