Gene : Thecc1EG016120 T. cacao v1.1
Defline:  (1 of 10) PF08880 - QLQ (QLQ) Genomic Order:  2624
Name:  ? Thecc1EG016120 Secondary Identifier:  ? PAC:27447743
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016120 0.5kb upstream 0.5kb upstream 3551 true scaffold_3: 31395388-31398938 Theobroma cacao
Thecc1EG016120 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31398439-31398938 Theobroma cacao
Thecc1EG016120 0.5kb downstream 0.5kb downstream 3551 true scaffold_3: 31394888-31398438 Theobroma cacao
Thecc1EG016120 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31394888-31395387 Theobroma cacao
Thecc1EG016120 1.0kb upstream 1.0kb upstream 4051 true scaffold_3: 31395388-31399438 Theobroma cacao
Thecc1EG016120 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31398439-31399438 Theobroma cacao
Thecc1EG016120 1.0kb downstream 1.0kb downstream 4051 true scaffold_3: 31394388-31398438 Theobroma cacao
Thecc1EG016120 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31394388-31395387 Theobroma cacao
Thecc1EG016120 2.0kb upstream 2.0kb upstream 5051 true scaffold_3: 31395388-31400438 Theobroma cacao
Thecc1EG016120 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31398439-31400438 Theobroma cacao
Thecc1EG016120 2.0kb downstream 2.0kb downstream 5051 true scaffold_3: 31393388-31398438 Theobroma cacao
Thecc1EG016120 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31393388-31395387 Theobroma cacao
Thecc1EG016120 5.0kb upstream 5.0kb upstream 8051 true scaffold_3: 31395388-31403438 Theobroma cacao
Thecc1EG016120 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31398439-31403438 Theobroma cacao
Thecc1EG016120 5.0kb downstream 5.0kb downstream 8051 true scaffold_3: 31390388-31398438 Theobroma cacao
Thecc1EG016120 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31390388-31395387 Theobroma cacao
Thecc1EG016120 10.0kb upstream 10.0kb upstream 13051 true scaffold_3: 31395388-31408438 Theobroma cacao
Thecc1EG016120 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31398439-31408438 Theobroma cacao
Thecc1EG016120 10.0kb downstream 10.0kb downstream 13051 true scaffold_3: 31385388-31398438 Theobroma cacao
Thecc1EG016120 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31385388-31395387 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826305 5264 Brassicales-Malvales View MSA
124351052 5266 SBM View MSA
124246998 5268 Malvidae View MSA
124074124 5270 Rosid View MSA
123750721 5271 Pentapetalae View MSA
122795468 5272 Eudicot View MSA
122049590 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain