Gene : Thecc1EG016133 T. cacao v1.1
Defline:  (1 of 5) PTHR13935//PTHR13935:SF54 - ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED // TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  2636
Name:  ? Thecc1EG016133 Secondary Identifier:  ? PAC:27448755
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016133 0.5kb upstream 0.5kb upstream 1846 true scaffold_3: 31441590-31443435 Theobroma cacao
Thecc1EG016133 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31441590-31442089 Theobroma cacao
Thecc1EG016133 0.5kb downstream 0.5kb downstream 1846 true scaffold_3: 31442090-31443935 Theobroma cacao
Thecc1EG016133 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31443436-31443935 Theobroma cacao
Thecc1EG016133 1.0kb upstream 1.0kb upstream 2346 true scaffold_3: 31441090-31443435 Theobroma cacao
Thecc1EG016133 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31441090-31442089 Theobroma cacao
Thecc1EG016133 1.0kb downstream 1.0kb downstream 2346 true scaffold_3: 31442090-31444435 Theobroma cacao
Thecc1EG016133 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31443436-31444435 Theobroma cacao
Thecc1EG016133 2.0kb upstream 2.0kb upstream 3346 true scaffold_3: 31440090-31443435 Theobroma cacao
Thecc1EG016133 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31440090-31442089 Theobroma cacao
Thecc1EG016133 2.0kb downstream 2.0kb downstream 3346 true scaffold_3: 31442090-31445435 Theobroma cacao
Thecc1EG016133 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31443436-31445435 Theobroma cacao
Thecc1EG016133 5.0kb upstream 5.0kb upstream 6346 true scaffold_3: 31437090-31443435 Theobroma cacao
Thecc1EG016133 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31437090-31442089 Theobroma cacao
Thecc1EG016133 5.0kb downstream 5.0kb downstream 6346 true scaffold_3: 31442090-31448435 Theobroma cacao
Thecc1EG016133 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31443436-31448435 Theobroma cacao
Thecc1EG016133 10.0kb upstream 10.0kb upstream 11346 true scaffold_3: 31432090-31443435 Theobroma cacao
Thecc1EG016133 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31432090-31442089 Theobroma cacao
Thecc1EG016133 10.0kb downstream 10.0kb downstream 11346 true scaffold_3: 31442090-31453435 Theobroma cacao
Thecc1EG016133 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31443436-31453435 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837803 5264 Brassicales-Malvales View MSA
124351097 5266 SBM View MSA
124249323 5268 Malvidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain