Gene : Thecc1EG016102 T. cacao v1.1
Defline:  (1 of 1) PTHR31100:SF15 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 24-RELATED Genomic Order:  2606
Name:  ? Thecc1EG016102 Secondary Identifier:  ? PAC:27450282
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016102 0.5kb upstream 0.5kb upstream 1821 true scaffold_3: 31311467-31313287 Theobroma cacao
Thecc1EG016102 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31311467-31311966 Theobroma cacao
Thecc1EG016102 0.5kb downstream 0.5kb downstream 1821 true scaffold_3: 31311967-31313787 Theobroma cacao
Thecc1EG016102 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31313288-31313787 Theobroma cacao
Thecc1EG016102 1.0kb upstream 1.0kb upstream 2321 true scaffold_3: 31310967-31313287 Theobroma cacao
Thecc1EG016102 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31310967-31311966 Theobroma cacao
Thecc1EG016102 1.0kb downstream 1.0kb downstream 2321 true scaffold_3: 31311967-31314287 Theobroma cacao
Thecc1EG016102 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31313288-31314287 Theobroma cacao
Thecc1EG016102 2.0kb upstream 2.0kb upstream 3321 true scaffold_3: 31309967-31313287 Theobroma cacao
Thecc1EG016102 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31309967-31311966 Theobroma cacao
Thecc1EG016102 2.0kb downstream 2.0kb downstream 3321 true scaffold_3: 31311967-31315287 Theobroma cacao
Thecc1EG016102 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31313288-31315287 Theobroma cacao
Thecc1EG016102 5.0kb upstream 5.0kb upstream 6321 true scaffold_3: 31306967-31313287 Theobroma cacao
Thecc1EG016102 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31306967-31311966 Theobroma cacao
Thecc1EG016102 5.0kb downstream 5.0kb downstream 6321 true scaffold_3: 31311967-31318287 Theobroma cacao
Thecc1EG016102 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31313288-31318287 Theobroma cacao
Thecc1EG016102 10.0kb upstream 10.0kb upstream 11321 true scaffold_3: 31301967-31313287 Theobroma cacao
Thecc1EG016102 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31301967-31311966 Theobroma cacao
Thecc1EG016102 10.0kb downstream 10.0kb downstream 11321 true scaffold_3: 31311967-31323287 Theobroma cacao
Thecc1EG016102 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31313288-31323287 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837037 5264 Brassicales-Malvales View MSA
124344356 5266 SBM View MSA
124246711 5268 Malvidae View MSA
124066215 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain