Gene : Thecc1EG016079 T. cacao v1.1
Defline:  (1 of 2) PTHR22883//PTHR22883:SF66 - ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN // PROTEIN S-ACYLTRANSFERASE 13-RELATED Genomic Order:  2587
Name:  ? Thecc1EG016079 Secondary Identifier:  ? PAC:27446734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016079 0.5kb upstream 0.5kb upstream 4276 true scaffold_3: 31159122-31163397 Theobroma cacao
Thecc1EG016079 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31162898-31163397 Theobroma cacao
Thecc1EG016079 0.5kb downstream 0.5kb downstream 4276 true scaffold_3: 31158622-31162897 Theobroma cacao
Thecc1EG016079 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31158622-31159121 Theobroma cacao
Thecc1EG016079 1.0kb upstream 1.0kb upstream 4776 true scaffold_3: 31159122-31163897 Theobroma cacao
Thecc1EG016079 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31162898-31163897 Theobroma cacao
Thecc1EG016079 1.0kb downstream 1.0kb downstream 4776 true scaffold_3: 31158122-31162897 Theobroma cacao
Thecc1EG016079 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31158122-31159121 Theobroma cacao
Thecc1EG016079 2.0kb upstream 2.0kb upstream 5776 true scaffold_3: 31159122-31164897 Theobroma cacao
Thecc1EG016079 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31162898-31164897 Theobroma cacao
Thecc1EG016079 2.0kb downstream 2.0kb downstream 5776 true scaffold_3: 31157122-31162897 Theobroma cacao
Thecc1EG016079 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31157122-31159121 Theobroma cacao
Thecc1EG016079 5.0kb upstream 5.0kb upstream 8776 true scaffold_3: 31159122-31167897 Theobroma cacao
Thecc1EG016079 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31162898-31167897 Theobroma cacao
Thecc1EG016079 5.0kb downstream 5.0kb downstream 8776 true scaffold_3: 31154122-31162897 Theobroma cacao
Thecc1EG016079 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31154122-31159121 Theobroma cacao
Thecc1EG016079 10.0kb upstream 10.0kb upstream 13776 true scaffold_3: 31159122-31172897 Theobroma cacao
Thecc1EG016079 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31162898-31172897 Theobroma cacao
Thecc1EG016079 10.0kb downstream 10.0kb downstream 13776 true scaffold_3: 31149122-31162897 Theobroma cacao
Thecc1EG016079 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31149122-31159121 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827222 5264 Brassicales-Malvales View MSA
124347563 5266 SBM View MSA
124245546 5268 Malvidae View MSA
124066729 5270 Rosid View MSA
123743778 5271 Pentapetalae View MSA
122788301 5272 Eudicot View MSA
122049662 5273 Angiosperm View MSA
121349206 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain