Gene : Thecc1EG016041 T. cacao v1.1
Defline:  (1 of 5) PTHR31080//PTHR31080:SF19 - FAMILY NOT NAMED // PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Genomic Order:  2550
Name:  ? Thecc1EG016041 Secondary Identifier:  ? PAC:27448267
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016041 0.5kb upstream 0.5kb upstream 1564 true scaffold_3: 30992711-30994274 Theobroma cacao
Thecc1EG016041 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30993775-30994274 Theobroma cacao
Thecc1EG016041 0.5kb downstream 0.5kb downstream 1564 true scaffold_3: 30992211-30993774 Theobroma cacao
Thecc1EG016041 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30992211-30992710 Theobroma cacao
Thecc1EG016041 1.0kb upstream 1.0kb upstream 2064 true scaffold_3: 30992711-30994774 Theobroma cacao
Thecc1EG016041 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30993775-30994774 Theobroma cacao
Thecc1EG016041 1.0kb downstream 1.0kb downstream 2064 true scaffold_3: 30991711-30993774 Theobroma cacao
Thecc1EG016041 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30991711-30992710 Theobroma cacao
Thecc1EG016041 2.0kb upstream 2.0kb upstream 3064 true scaffold_3: 30992711-30995774 Theobroma cacao
Thecc1EG016041 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30993775-30995774 Theobroma cacao
Thecc1EG016041 2.0kb downstream 2.0kb downstream 3064 true scaffold_3: 30990711-30993774 Theobroma cacao
Thecc1EG016041 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30990711-30992710 Theobroma cacao
Thecc1EG016041 5.0kb upstream 5.0kb upstream 6064 true scaffold_3: 30992711-30998774 Theobroma cacao
Thecc1EG016041 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30993775-30998774 Theobroma cacao
Thecc1EG016041 5.0kb downstream 5.0kb downstream 6064 true scaffold_3: 30987711-30993774 Theobroma cacao
Thecc1EG016041 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30987711-30992710 Theobroma cacao
Thecc1EG016041 10.0kb upstream 10.0kb upstream 11064 true scaffold_3: 30992711-31003774 Theobroma cacao
Thecc1EG016041 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30993775-31003774 Theobroma cacao
Thecc1EG016041 10.0kb downstream 10.0kb downstream 11064 true scaffold_3: 30982711-30993774 Theobroma cacao
Thecc1EG016041 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30982711-30992710 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824752 5264 Brassicales-Malvales View MSA
124349527 5266 SBM View MSA
124251133 5268 Malvidae View MSA
124072666 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain