Gene : Thecc1EG016008 T. cacao v1.1
Defline:  (1 of 1) PTHR14969:SF13 - AT30094P Genomic Order:  2523
Name:  ? Thecc1EG016008 Secondary Identifier:  ? PAC:27449503
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao TRIGLSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016008 0.5kb upstream 0.5kb upstream 6420 true scaffold_3: 30805197-30811616 Theobroma cacao
Thecc1EG016008 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30811117-30811616 Theobroma cacao
Thecc1EG016008 0.5kb downstream 0.5kb downstream 6420 true scaffold_3: 30804697-30811116 Theobroma cacao
Thecc1EG016008 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30804697-30805196 Theobroma cacao
Thecc1EG016008 1.0kb upstream 1.0kb upstream 6920 true scaffold_3: 30805197-30812116 Theobroma cacao
Thecc1EG016008 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30811117-30812116 Theobroma cacao
Thecc1EG016008 1.0kb downstream 1.0kb downstream 6920 true scaffold_3: 30804197-30811116 Theobroma cacao
Thecc1EG016008 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30804197-30805196 Theobroma cacao
Thecc1EG016008 2.0kb upstream 2.0kb upstream 7920 true scaffold_3: 30805197-30813116 Theobroma cacao
Thecc1EG016008 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30811117-30813116 Theobroma cacao
Thecc1EG016008 2.0kb downstream 2.0kb downstream 7920 true scaffold_3: 30803197-30811116 Theobroma cacao
Thecc1EG016008 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30803197-30805196 Theobroma cacao
Thecc1EG016008 5.0kb upstream 5.0kb upstream 10920 true scaffold_3: 30805197-30816116 Theobroma cacao
Thecc1EG016008 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30811117-30816116 Theobroma cacao
Thecc1EG016008 5.0kb downstream 5.0kb downstream 10920 true scaffold_3: 30800197-30811116 Theobroma cacao
Thecc1EG016008 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30800197-30805196 Theobroma cacao
Thecc1EG016008 10.0kb upstream 10.0kb upstream 15920 true scaffold_3: 30805197-30821116 Theobroma cacao
Thecc1EG016008 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30811117-30821116 Theobroma cacao
Thecc1EG016008 10.0kb downstream 10.0kb downstream 15920 true scaffold_3: 30795197-30811116 Theobroma cacao
Thecc1EG016008 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30795197-30805196 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831270 5264 Brassicales-Malvales View MSA
124342194 5266 SBM View MSA
124243387 5268 Malvidae View MSA
124068093 5270 Rosid View MSA
123737030 5271 Pentapetalae View MSA
122788421 5272 Eudicot View MSA
122043486 5273 Angiosperm View MSA
121349083 5274 Embryophyte View MSA
123381157 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain