Gene : Thecc1EG016250 T. cacao v1.1
Defline:  (1 of 1) 6.3.2.2 - Glutamate--cysteine ligase / Gamma-glutamylcysteine synthetase Genomic Order:  2743
Name:  ? Thecc1EG016250 Secondary Identifier:  ? PAC:27451068
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLUTATHIONESYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016250 0.5kb upstream 0.5kb upstream 7492 true scaffold_3: 32041777-32049268 Theobroma cacao
Thecc1EG016250 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32048769-32049268 Theobroma cacao
Thecc1EG016250 0.5kb downstream 0.5kb downstream 7492 true scaffold_3: 32041277-32048768 Theobroma cacao
Thecc1EG016250 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32041277-32041776 Theobroma cacao
Thecc1EG016250 1.0kb upstream 1.0kb upstream 7992 true scaffold_3: 32041777-32049768 Theobroma cacao
Thecc1EG016250 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32048769-32049768 Theobroma cacao
Thecc1EG016250 1.0kb downstream 1.0kb downstream 7992 true scaffold_3: 32040777-32048768 Theobroma cacao
Thecc1EG016250 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32040777-32041776 Theobroma cacao
Thecc1EG016250 2.0kb upstream 2.0kb upstream 8992 true scaffold_3: 32041777-32050768 Theobroma cacao
Thecc1EG016250 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32048769-32050768 Theobroma cacao
Thecc1EG016250 2.0kb downstream 2.0kb downstream 8992 true scaffold_3: 32039777-32048768 Theobroma cacao
Thecc1EG016250 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32039777-32041776 Theobroma cacao
Thecc1EG016250 5.0kb upstream 5.0kb upstream 11992 true scaffold_3: 32041777-32053768 Theobroma cacao
Thecc1EG016250 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32048769-32053768 Theobroma cacao
Thecc1EG016250 5.0kb downstream 5.0kb downstream 11992 true scaffold_3: 32036777-32048768 Theobroma cacao
Thecc1EG016250 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32036777-32041776 Theobroma cacao
Thecc1EG016250 10.0kb upstream 10.0kb upstream 16992 true scaffold_3: 32041777-32058768 Theobroma cacao
Thecc1EG016250 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32048769-32058768 Theobroma cacao
Thecc1EG016250 10.0kb downstream 10.0kb downstream 16992 true scaffold_3: 32031777-32048768 Theobroma cacao
Thecc1EG016250 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32031777-32041776 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839403 5264 Brassicales-Malvales View MSA
124343642 5266 SBM View MSA
124247556 5268 Malvidae View MSA
124066026 5270 Rosid View MSA
123737554 5271 Pentapetalae View MSA
122790790 5272 Eudicot View MSA
122044028 5273 Angiosperm View MSA
121346589 5274 Embryophyte View MSA
123424300 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain