Gene : Thecc1EG016238 T. cacao v1.1
Defline:  (1 of 1) PTHR10024//PTHR10024:SF225 - SYNAPTOTAGMIN // C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  2732
Name:  ? Thecc1EG016238 Secondary Identifier:  ? PAC:27449938
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016238 0.5kb upstream 0.5kb upstream 7221 true scaffold_3: 31980141-31987361 Theobroma cacao
Thecc1EG016238 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31986862-31987361 Theobroma cacao
Thecc1EG016238 0.5kb downstream 0.5kb downstream 7221 true scaffold_3: 31979641-31986861 Theobroma cacao
Thecc1EG016238 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31979641-31980140 Theobroma cacao
Thecc1EG016238 1.0kb upstream 1.0kb upstream 7721 true scaffold_3: 31980141-31987861 Theobroma cacao
Thecc1EG016238 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31986862-31987861 Theobroma cacao
Thecc1EG016238 1.0kb downstream 1.0kb downstream 7721 true scaffold_3: 31979141-31986861 Theobroma cacao
Thecc1EG016238 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31979141-31980140 Theobroma cacao
Thecc1EG016238 2.0kb upstream 2.0kb upstream 8721 true scaffold_3: 31980141-31988861 Theobroma cacao
Thecc1EG016238 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31986862-31988861 Theobroma cacao
Thecc1EG016238 2.0kb downstream 2.0kb downstream 8721 true scaffold_3: 31978141-31986861 Theobroma cacao
Thecc1EG016238 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31978141-31980140 Theobroma cacao
Thecc1EG016238 5.0kb upstream 5.0kb upstream 11721 true scaffold_3: 31980141-31991861 Theobroma cacao
Thecc1EG016238 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31986862-31991861 Theobroma cacao
Thecc1EG016238 5.0kb downstream 5.0kb downstream 11721 true scaffold_3: 31975141-31986861 Theobroma cacao
Thecc1EG016238 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31975141-31980140 Theobroma cacao
Thecc1EG016238 10.0kb upstream 10.0kb upstream 16721 true scaffold_3: 31980141-31996861 Theobroma cacao
Thecc1EG016238 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31986862-31996861 Theobroma cacao
Thecc1EG016238 10.0kb downstream 10.0kb downstream 16721 true scaffold_3: 31970141-31986861 Theobroma cacao
Thecc1EG016238 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31970141-31980140 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834352 5264 Brassicales-Malvales View MSA
124337277 5266 SBM View MSA
124243471 5268 Malvidae View MSA
124071853 5270 Rosid View MSA
123744879 5271 Pentapetalae View MSA
122793721 5272 Eudicot View MSA
122045075 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain