Gene : Thecc1EG016231 T. cacao v1.1

Defline:  (1 of 1) K11883 - RNA-binding protein NOB1 (NOB1) Genomic Order:  2726
Name:  ? Thecc1EG016231 Secondary Identifier:  ? PAC:27448412

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016231 0.5kb upstream 0.5kb upstream 4017 true scaffold_3: 31950952-31954968 Theobroma cacao
Thecc1EG016231 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31954469-31954968 Theobroma cacao
Thecc1EG016231 0.5kb downstream 0.5kb downstream 4017 true scaffold_3: 31950452-31954468 Theobroma cacao
Thecc1EG016231 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31950452-31950951 Theobroma cacao
Thecc1EG016231 1.0kb upstream 1.0kb upstream 4517 true scaffold_3: 31950952-31955468 Theobroma cacao
Thecc1EG016231 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31954469-31955468 Theobroma cacao
Thecc1EG016231 1.0kb downstream 1.0kb downstream 4517 true scaffold_3: 31949952-31954468 Theobroma cacao
Thecc1EG016231 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31949952-31950951 Theobroma cacao
Thecc1EG016231 2.0kb upstream 2.0kb upstream 5517 true scaffold_3: 31950952-31956468 Theobroma cacao
Thecc1EG016231 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31954469-31956468 Theobroma cacao
Thecc1EG016231 2.0kb downstream 2.0kb downstream 5517 true scaffold_3: 31948952-31954468 Theobroma cacao
Thecc1EG016231 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31948952-31950951 Theobroma cacao
Thecc1EG016231 5.0kb upstream 5.0kb upstream 8517 true scaffold_3: 31950952-31959468 Theobroma cacao
Thecc1EG016231 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31954469-31959468 Theobroma cacao
Thecc1EG016231 5.0kb downstream 5.0kb downstream 8517 true scaffold_3: 31945952-31954468 Theobroma cacao
Thecc1EG016231 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31945952-31950951 Theobroma cacao
Thecc1EG016231 10.0kb upstream 10.0kb upstream 13517 true scaffold_3: 31950952-31964468 Theobroma cacao
Thecc1EG016231 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31954469-31964468 Theobroma cacao
Thecc1EG016231 10.0kb downstream 10.0kb downstream 13517 true scaffold_3: 31940952-31954468 Theobroma cacao
Thecc1EG016231 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31940952-31950951 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041459 5273 Angiosperm View MSA
123832543 5264 Brassicales-Malvales View MSA
124342524 5266 SBM View MSA
124237613 5268 Malvidae View MSA
124063585 5270 Rosid View MSA
123741219 5271 Pentapetalae View MSA
122790969 5272 Eudicot View MSA
121349928 5274 Embryophyte View MSA
123425485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain