Gene : Thecc1EG016232 T. cacao v1.1

Defline:  (1 of 4) PTHR11913//PTHR11913:SF30 - COFILIN-RELATED // ACTIN-DEPOLYMERIZING FACTOR 10-RELATED Genomic Order:  2727
Name:  ? Thecc1EG016232 Secondary Identifier:  ? PAC:27447015

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016232 0.5kb upstream 0.5kb upstream 1888 true scaffold_3: 31954719-31956606 Theobroma cacao
Thecc1EG016232 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31956107-31956606 Theobroma cacao
Thecc1EG016232 0.5kb downstream 0.5kb downstream 1888 true scaffold_3: 31954219-31956106 Theobroma cacao
Thecc1EG016232 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31954219-31954718 Theobroma cacao
Thecc1EG016232 1.0kb upstream 1.0kb upstream 2388 true scaffold_3: 31954719-31957106 Theobroma cacao
Thecc1EG016232 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31956107-31957106 Theobroma cacao
Thecc1EG016232 1.0kb downstream 1.0kb downstream 2388 true scaffold_3: 31953719-31956106 Theobroma cacao
Thecc1EG016232 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31953719-31954718 Theobroma cacao
Thecc1EG016232 2.0kb upstream 2.0kb upstream 3388 true scaffold_3: 31954719-31958106 Theobroma cacao
Thecc1EG016232 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31956107-31958106 Theobroma cacao
Thecc1EG016232 2.0kb downstream 2.0kb downstream 3388 true scaffold_3: 31952719-31956106 Theobroma cacao
Thecc1EG016232 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31952719-31954718 Theobroma cacao
Thecc1EG016232 5.0kb upstream 5.0kb upstream 6388 true scaffold_3: 31954719-31961106 Theobroma cacao
Thecc1EG016232 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31956107-31961106 Theobroma cacao
Thecc1EG016232 5.0kb downstream 5.0kb downstream 6388 true scaffold_3: 31949719-31956106 Theobroma cacao
Thecc1EG016232 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31949719-31954718 Theobroma cacao
Thecc1EG016232 10.0kb upstream 10.0kb upstream 11388 true scaffold_3: 31954719-31966106 Theobroma cacao
Thecc1EG016232 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31956107-31966106 Theobroma cacao
Thecc1EG016232 10.0kb downstream 10.0kb downstream 11388 true scaffold_3: 31944719-31956106 Theobroma cacao
Thecc1EG016232 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31944719-31954718 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841022 5264 Brassicales-Malvales View MSA
124338052 5266 SBM View MSA
124251450 5268 Malvidae View MSA
124071244 5270 Rosid View MSA
123753714 5271 Pentapetalae View MSA
122797061 5272 Eudicot View MSA
122051057 5273 Angiosperm View MSA
121347384 5274 Embryophyte View MSA
123427705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain