Gene : Thecc1EG016198 T. cacao v1.1

Defline:  (1 of 1) PTHR10015//PTHR10015:SF169 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-2B Genomic Order:  2696
Name:  ? Thecc1EG016198 Secondary Identifier:  ? PAC:27451161

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016198 0.5kb upstream 0.5kb upstream 2915 true scaffold_3: 31818875-31821789 Theobroma cacao
Thecc1EG016198 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31821290-31821789 Theobroma cacao
Thecc1EG016198 0.5kb downstream 0.5kb downstream 2915 true scaffold_3: 31818375-31821289 Theobroma cacao
Thecc1EG016198 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31818375-31818874 Theobroma cacao
Thecc1EG016198 1.0kb upstream 1.0kb upstream 3415 true scaffold_3: 31818875-31822289 Theobroma cacao
Thecc1EG016198 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31821290-31822289 Theobroma cacao
Thecc1EG016198 1.0kb downstream 1.0kb downstream 3415 true scaffold_3: 31817875-31821289 Theobroma cacao
Thecc1EG016198 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31817875-31818874 Theobroma cacao
Thecc1EG016198 2.0kb upstream 2.0kb upstream 4415 true scaffold_3: 31818875-31823289 Theobroma cacao
Thecc1EG016198 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31821290-31823289 Theobroma cacao
Thecc1EG016198 2.0kb downstream 2.0kb downstream 4415 true scaffold_3: 31816875-31821289 Theobroma cacao
Thecc1EG016198 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31816875-31818874 Theobroma cacao
Thecc1EG016198 5.0kb upstream 5.0kb upstream 7415 true scaffold_3: 31818875-31826289 Theobroma cacao
Thecc1EG016198 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31821290-31826289 Theobroma cacao
Thecc1EG016198 5.0kb downstream 5.0kb downstream 7415 true scaffold_3: 31813875-31821289 Theobroma cacao
Thecc1EG016198 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31813875-31818874 Theobroma cacao
Thecc1EG016198 10.0kb upstream 10.0kb upstream 12415 true scaffold_3: 31818875-31831289 Theobroma cacao
Thecc1EG016198 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31821290-31831289 Theobroma cacao
Thecc1EG016198 10.0kb downstream 10.0kb downstream 12415 true scaffold_3: 31808875-31821289 Theobroma cacao
Thecc1EG016198 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31808875-31818874 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832596 5264 Brassicales-Malvales View MSA
124342086 5266 SBM View MSA
124242310 5268 Malvidae View MSA
124066248 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain