Gene : Thecc1EG016489 T. cacao v1.1
Defline:  (1 of 1) KOG1493//KOG4172 - Anaphase-promoting complex (APC), subunit 11 // Predicted E3 ubiquitin ligase Genomic Order:  2953
Name:  ? Thecc1EG016489 Secondary Identifier:  ? PAC:27447887
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016489 0.5kb upstream 0.5kb upstream 9065 true scaffold_3: 33087716-33096780 Theobroma cacao
Thecc1EG016489 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33087716-33088215 Theobroma cacao
Thecc1EG016489 0.5kb downstream 0.5kb downstream 9065 true scaffold_3: 33088216-33097280 Theobroma cacao
Thecc1EG016489 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33096781-33097280 Theobroma cacao
Thecc1EG016489 1.0kb upstream 1.0kb upstream 9565 true scaffold_3: 33087216-33096780 Theobroma cacao
Thecc1EG016489 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33087216-33088215 Theobroma cacao
Thecc1EG016489 1.0kb downstream 1.0kb downstream 9565 true scaffold_3: 33088216-33097780 Theobroma cacao
Thecc1EG016489 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33096781-33097780 Theobroma cacao
Thecc1EG016489 2.0kb upstream 2.0kb upstream 10565 true scaffold_3: 33086216-33096780 Theobroma cacao
Thecc1EG016489 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33086216-33088215 Theobroma cacao
Thecc1EG016489 2.0kb downstream 2.0kb downstream 10565 true scaffold_3: 33088216-33098780 Theobroma cacao
Thecc1EG016489 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33096781-33098780 Theobroma cacao
Thecc1EG016489 5.0kb upstream 5.0kb upstream 13565 true scaffold_3: 33083216-33096780 Theobroma cacao
Thecc1EG016489 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33083216-33088215 Theobroma cacao
Thecc1EG016489 5.0kb downstream 5.0kb downstream 13565 true scaffold_3: 33088216-33101780 Theobroma cacao
Thecc1EG016489 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33096781-33101780 Theobroma cacao
Thecc1EG016489 10.0kb upstream 10.0kb upstream 18565 true scaffold_3: 33078216-33096780 Theobroma cacao
Thecc1EG016489 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33078216-33088215 Theobroma cacao
Thecc1EG016489 10.0kb downstream 10.0kb downstream 18565 true scaffold_3: 33088216-33106780 Theobroma cacao
Thecc1EG016489 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33096781-33106780 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829731 5264 Brassicales-Malvales View MSA
124347723 5266 SBM View MSA
124237392 5268 Malvidae View MSA
124061818 5270 Rosid View MSA
123737188 5271 Pentapetalae View MSA
122794309 5272 Eudicot View MSA
122043530 5273 Angiosperm View MSA
121343947 5274 Embryophyte View MSA
123379945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain