Gene : Thecc1EG016473 T. cacao v1.1
Defline:  (1 of 1) PTHR11349//PTHR11349:SF53 - NUCLEOSIDE DIPHOSPHATE KINASE // NUCLEOSIDE DIPHOSPHATE KINASE-RELATED Genomic Order:  2939
Name:  ? Thecc1EG016473 Secondary Identifier:  ? PAC:27451177
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-162 Theobroma cacao pathologic  
Tcacao PWY-6126 Theobroma cacao pathologic  
Tcacao PWY-6545 Theobroma cacao pathologic  
Tcacao PWY-7176 Theobroma cacao pathologic  
Tcacao PWY-7184 Theobroma cacao pathologic  
Tcacao PWY-7196 Theobroma cacao pathologic  
Tcacao PWY-7197 Theobroma cacao pathologic  
Tcacao PWY-7200 Theobroma cacao pathologic  
Tcacao PWY-7205 Theobroma cacao pathologic  
Tcacao PWY-7208 Theobroma cacao pathologic  
Tcacao PWY-7210 Theobroma cacao pathologic  
Tcacao PWY-7211 Theobroma cacao pathologic  
Tcacao PWY-7220 Theobroma cacao pathologic  
Tcacao PWY-7221 Theobroma cacao pathologic  
Tcacao PWY-7222 Theobroma cacao pathologic  
Tcacao PWY-7224 Theobroma cacao pathologic  
Tcacao PWY-7226 Theobroma cacao pathologic  
Tcacao PWY-7227 Theobroma cacao pathologic  
Tcacao PWY-7228 Theobroma cacao pathologic  
Tcacao PWY-7229 Theobroma cacao pathologic  
Tcacao PWY-841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016473 0.5kb upstream 0.5kb upstream 4311 true scaffold_3: 33025183-33029493 Theobroma cacao
Thecc1EG016473 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33025183-33025682 Theobroma cacao
Thecc1EG016473 0.5kb downstream 0.5kb downstream 4311 true scaffold_3: 33025683-33029993 Theobroma cacao
Thecc1EG016473 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33029494-33029993 Theobroma cacao
Thecc1EG016473 1.0kb upstream 1.0kb upstream 4811 true scaffold_3: 33024683-33029493 Theobroma cacao
Thecc1EG016473 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33024683-33025682 Theobroma cacao
Thecc1EG016473 1.0kb downstream 1.0kb downstream 4811 true scaffold_3: 33025683-33030493 Theobroma cacao
Thecc1EG016473 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33029494-33030493 Theobroma cacao
Thecc1EG016473 2.0kb upstream 2.0kb upstream 5811 true scaffold_3: 33023683-33029493 Theobroma cacao
Thecc1EG016473 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33023683-33025682 Theobroma cacao
Thecc1EG016473 2.0kb downstream 2.0kb downstream 5811 true scaffold_3: 33025683-33031493 Theobroma cacao
Thecc1EG016473 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33029494-33031493 Theobroma cacao
Thecc1EG016473 5.0kb upstream 5.0kb upstream 8811 true scaffold_3: 33020683-33029493 Theobroma cacao
Thecc1EG016473 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33020683-33025682 Theobroma cacao
Thecc1EG016473 5.0kb downstream 5.0kb downstream 8811 true scaffold_3: 33025683-33034493 Theobroma cacao
Thecc1EG016473 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33029494-33034493 Theobroma cacao
Thecc1EG016473 10.0kb upstream 10.0kb upstream 13811 true scaffold_3: 33015683-33029493 Theobroma cacao
Thecc1EG016473 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33015683-33025682 Theobroma cacao
Thecc1EG016473 10.0kb downstream 10.0kb downstream 13811 true scaffold_3: 33025683-33039493 Theobroma cacao
Thecc1EG016473 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33029494-33039493 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828866 5264 Brassicales-Malvales View MSA
124337137 5266 SBM View MSA
124238363 5268 Malvidae View MSA
124068099 5270 Rosid View MSA
123749251 5271 Pentapetalae View MSA
122792257 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain