Gene : Thecc1EG016462 T. cacao v1.1
Defline:  (1 of 5) PTHR14155:SF157 - RING-H2 FINGER PROTEIN ATL69-RELATED Genomic Order:  2928
Name:  ? Thecc1EG016462 Secondary Identifier:  ? PAC:27447354
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016462 0.5kb upstream 0.5kb upstream 1269 true scaffold_3: 32984619-32985887 Theobroma cacao
Thecc1EG016462 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32985388-32985887 Theobroma cacao
Thecc1EG016462 0.5kb downstream 0.5kb downstream 1269 true scaffold_3: 32984119-32985387 Theobroma cacao
Thecc1EG016462 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32984119-32984618 Theobroma cacao
Thecc1EG016462 1.0kb upstream 1.0kb upstream 1769 true scaffold_3: 32984619-32986387 Theobroma cacao
Thecc1EG016462 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32985388-32986387 Theobroma cacao
Thecc1EG016462 1.0kb downstream 1.0kb downstream 1769 true scaffold_3: 32983619-32985387 Theobroma cacao
Thecc1EG016462 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32983619-32984618 Theobroma cacao
Thecc1EG016462 2.0kb upstream 2.0kb upstream 2769 true scaffold_3: 32984619-32987387 Theobroma cacao
Thecc1EG016462 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32985388-32987387 Theobroma cacao
Thecc1EG016462 2.0kb downstream 2.0kb downstream 2769 true scaffold_3: 32982619-32985387 Theobroma cacao
Thecc1EG016462 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32982619-32984618 Theobroma cacao
Thecc1EG016462 5.0kb upstream 5.0kb upstream 5769 true scaffold_3: 32984619-32990387 Theobroma cacao
Thecc1EG016462 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32985388-32990387 Theobroma cacao
Thecc1EG016462 5.0kb downstream 5.0kb downstream 5769 true scaffold_3: 32979619-32985387 Theobroma cacao
Thecc1EG016462 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32979619-32984618 Theobroma cacao
Thecc1EG016462 10.0kb upstream 10.0kb upstream 10769 true scaffold_3: 32984619-32995387 Theobroma cacao
Thecc1EG016462 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32985388-32995387 Theobroma cacao
Thecc1EG016462 10.0kb downstream 10.0kb downstream 10769 true scaffold_3: 32974619-32985387 Theobroma cacao
Thecc1EG016462 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32974619-32984618 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818044 5264 Brassicales-Malvales Singleton cluster - no MSA
124314370 5266 SBM Singleton cluster - no MSA
124249349 5268 Malvidae View MSA
124062741 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain