Gene : Thecc1EG016377 T. cacao v1.1
Defline:  (1 of 1) K02518 - translation initiation factor IF-1 (infA) Genomic Order:  2853
Name:  ? Thecc1EG016377 Secondary Identifier:  ? PAC:27450935
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016377 0.5kb upstream 0.5kb upstream 2752 true scaffold_3: 32617613-32620364 Theobroma cacao
Thecc1EG016377 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32619865-32620364 Theobroma cacao
Thecc1EG016377 0.5kb downstream 0.5kb downstream 2752 true scaffold_3: 32617113-32619864 Theobroma cacao
Thecc1EG016377 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32617113-32617612 Theobroma cacao
Thecc1EG016377 1.0kb upstream 1.0kb upstream 3252 true scaffold_3: 32617613-32620864 Theobroma cacao
Thecc1EG016377 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32619865-32620864 Theobroma cacao
Thecc1EG016377 1.0kb downstream 1.0kb downstream 3252 true scaffold_3: 32616613-32619864 Theobroma cacao
Thecc1EG016377 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32616613-32617612 Theobroma cacao
Thecc1EG016377 2.0kb upstream 2.0kb upstream 4252 true scaffold_3: 32617613-32621864 Theobroma cacao
Thecc1EG016377 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32619865-32621864 Theobroma cacao
Thecc1EG016377 2.0kb downstream 2.0kb downstream 4252 true scaffold_3: 32615613-32619864 Theobroma cacao
Thecc1EG016377 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32615613-32617612 Theobroma cacao
Thecc1EG016377 5.0kb upstream 5.0kb upstream 7252 true scaffold_3: 32617613-32624864 Theobroma cacao
Thecc1EG016377 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32619865-32624864 Theobroma cacao
Thecc1EG016377 5.0kb downstream 5.0kb downstream 7252 true scaffold_3: 32612613-32619864 Theobroma cacao
Thecc1EG016377 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32612613-32617612 Theobroma cacao
Thecc1EG016377 10.0kb upstream 10.0kb upstream 12252 true scaffold_3: 32617613-32629864 Theobroma cacao
Thecc1EG016377 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32619865-32629864 Theobroma cacao
Thecc1EG016377 10.0kb downstream 10.0kb downstream 12252 true scaffold_3: 32607613-32619864 Theobroma cacao
Thecc1EG016377 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32607613-32617612 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028984 5273 Angiosperm View MSA
123833531 5264 Brassicales-Malvales View MSA
124340122 5266 SBM View MSA
124243988 5268 Malvidae View MSA
124050669 5270 Rosid View MSA
123744849 5271 Pentapetalae View MSA
122771270 5272 Eudicot View MSA
121351623 5274 Embryophyte View MSA
123428074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain