Gene : Thecc1EG016374 T. cacao v1.1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF40 - NUCLEOPORIN-RELATED // DIRIGENT PROTEIN 12-RELATED Genomic Order:  2850
Name:  ? Thecc1EG016374 Secondary Identifier:  ? PAC:27449450
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016374 0.5kb upstream 0.5kb upstream 1380 true scaffold_3: 32613844-32615223 Theobroma cacao
Thecc1EG016374 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32614724-32615223 Theobroma cacao
Thecc1EG016374 0.5kb downstream 0.5kb downstream 1380 true scaffold_3: 32613344-32614723 Theobroma cacao
Thecc1EG016374 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32613344-32613843 Theobroma cacao
Thecc1EG016374 1.0kb upstream 1.0kb upstream 1880 true scaffold_3: 32613844-32615723 Theobroma cacao
Thecc1EG016374 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32614724-32615723 Theobroma cacao
Thecc1EG016374 1.0kb downstream 1.0kb downstream 1880 true scaffold_3: 32612844-32614723 Theobroma cacao
Thecc1EG016374 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32612844-32613843 Theobroma cacao
Thecc1EG016374 2.0kb upstream 2.0kb upstream 2880 true scaffold_3: 32613844-32616723 Theobroma cacao
Thecc1EG016374 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32614724-32616723 Theobroma cacao
Thecc1EG016374 2.0kb downstream 2.0kb downstream 2880 true scaffold_3: 32611844-32614723 Theobroma cacao
Thecc1EG016374 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32611844-32613843 Theobroma cacao
Thecc1EG016374 5.0kb upstream 5.0kb upstream 5880 true scaffold_3: 32613844-32619723 Theobroma cacao
Thecc1EG016374 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32614724-32619723 Theobroma cacao
Thecc1EG016374 5.0kb downstream 5.0kb downstream 5880 true scaffold_3: 32608844-32614723 Theobroma cacao
Thecc1EG016374 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32608844-32613843 Theobroma cacao
Thecc1EG016374 10.0kb upstream 10.0kb upstream 10880 true scaffold_3: 32613844-32624723 Theobroma cacao
Thecc1EG016374 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32614724-32624723 Theobroma cacao
Thecc1EG016374 10.0kb downstream 10.0kb downstream 10880 true scaffold_3: 32603844-32614723 Theobroma cacao
Thecc1EG016374 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32603844-32613843 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658081 5273 Angiosperm View MSA
123818431 5264 Brassicales-Malvales Singleton cluster - no MSA
124314743 5266 SBM Singleton cluster - no MSA
124163710 5268 Malvidae Singleton cluster - no MSA
124041073 5270 Rosid View MSA
123612118 5271 Pentapetalae View MSA
122646640 5272 Eudicot View MSA
120930096 5274 Embryophyte View MSA
122970634 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain