Gene : Thecc1EG016342 T. cacao v1.1
Defline:  (1 of 1) PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 Genomic Order:  2820
Name:  ? Thecc1EG016342 Secondary Identifier:  ? PAC:27449237
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016342 0.5kb upstream 0.5kb upstream 5331 true scaffold_3: 32455745-32461075 Theobroma cacao
Thecc1EG016342 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32460576-32461075 Theobroma cacao
Thecc1EG016342 0.5kb downstream 0.5kb downstream 5331 true scaffold_3: 32455245-32460575 Theobroma cacao
Thecc1EG016342 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32455245-32455744 Theobroma cacao
Thecc1EG016342 1.0kb upstream 1.0kb upstream 5831 true scaffold_3: 32455745-32461575 Theobroma cacao
Thecc1EG016342 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32460576-32461575 Theobroma cacao
Thecc1EG016342 1.0kb downstream 1.0kb downstream 5831 true scaffold_3: 32454745-32460575 Theobroma cacao
Thecc1EG016342 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32454745-32455744 Theobroma cacao
Thecc1EG016342 2.0kb upstream 2.0kb upstream 6831 true scaffold_3: 32455745-32462575 Theobroma cacao
Thecc1EG016342 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32460576-32462575 Theobroma cacao
Thecc1EG016342 2.0kb downstream 2.0kb downstream 6831 true scaffold_3: 32453745-32460575 Theobroma cacao
Thecc1EG016342 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32453745-32455744 Theobroma cacao
Thecc1EG016342 5.0kb upstream 5.0kb upstream 9831 true scaffold_3: 32455745-32465575 Theobroma cacao
Thecc1EG016342 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32460576-32465575 Theobroma cacao
Thecc1EG016342 5.0kb downstream 5.0kb downstream 9831 true scaffold_3: 32450745-32460575 Theobroma cacao
Thecc1EG016342 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32450745-32455744 Theobroma cacao
Thecc1EG016342 10.0kb upstream 10.0kb upstream 14831 true scaffold_3: 32455745-32470575 Theobroma cacao
Thecc1EG016342 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32460576-32470575 Theobroma cacao
Thecc1EG016342 10.0kb downstream 10.0kb downstream 14831 true scaffold_3: 32445745-32460575 Theobroma cacao
Thecc1EG016342 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32445745-32455744 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831534 5264 Brassicales-Malvales View MSA
124344109 5266 SBM View MSA
124237579 5268 Malvidae View MSA
124065499 5270 Rosid View MSA
123749374 5271 Pentapetalae View MSA
122793256 5272 Eudicot View MSA
122044830 5273 Angiosperm View MSA
121350394 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain