Gene : Thecc1EG016338 T. cacao v1.1
Defline:  (1 of 1) PTHR11751//PTHR11751:SF380 - SUBGROUP I AMINOTRANSFERASE RELATED // 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2-RELATED Genomic Order:  2817
Name:  ? Thecc1EG016338 Secondary Identifier:  ? PAC:27448691
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ETHYL-PWY Theobroma cacao pathologic  
Tcacao PWY-7270 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016338 0.5kb upstream 0.5kb upstream 3953 true scaffold_3: 32432893-32436845 Theobroma cacao
Thecc1EG016338 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32436346-32436845 Theobroma cacao
Thecc1EG016338 0.5kb downstream 0.5kb downstream 3953 true scaffold_3: 32432393-32436345 Theobroma cacao
Thecc1EG016338 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32432393-32432892 Theobroma cacao
Thecc1EG016338 1.0kb upstream 1.0kb upstream 4453 true scaffold_3: 32432893-32437345 Theobroma cacao
Thecc1EG016338 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32436346-32437345 Theobroma cacao
Thecc1EG016338 1.0kb downstream 1.0kb downstream 4453 true scaffold_3: 32431893-32436345 Theobroma cacao
Thecc1EG016338 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32431893-32432892 Theobroma cacao
Thecc1EG016338 2.0kb upstream 2.0kb upstream 5453 true scaffold_3: 32432893-32438345 Theobroma cacao
Thecc1EG016338 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32436346-32438345 Theobroma cacao
Thecc1EG016338 2.0kb downstream 2.0kb downstream 5453 true scaffold_3: 32430893-32436345 Theobroma cacao
Thecc1EG016338 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32430893-32432892 Theobroma cacao
Thecc1EG016338 5.0kb upstream 5.0kb upstream 8453 true scaffold_3: 32432893-32441345 Theobroma cacao
Thecc1EG016338 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32436346-32441345 Theobroma cacao
Thecc1EG016338 5.0kb downstream 5.0kb downstream 8453 true scaffold_3: 32427893-32436345 Theobroma cacao
Thecc1EG016338 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32427893-32432892 Theobroma cacao
Thecc1EG016338 10.0kb upstream 10.0kb upstream 13453 true scaffold_3: 32432893-32446345 Theobroma cacao
Thecc1EG016338 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32436346-32446345 Theobroma cacao
Thecc1EG016338 10.0kb downstream 10.0kb downstream 13453 true scaffold_3: 32422893-32436345 Theobroma cacao
Thecc1EG016338 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32422893-32432892 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832800 5264 Brassicales-Malvales View MSA
124351363 5266 SBM View MSA
124243868 5268 Malvidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain