Gene : Thecc1EG016646 T. cacao v1.1
Defline:  (1 of 1) PTHR13748//PTHR13748:SF40 - COBW-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3092
Name:  ? Thecc1EG016646 Secondary Identifier:  ? PAC:27448703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016646 0.5kb upstream 0.5kb upstream 4419 true scaffold_3: 33809616-33814034 Theobroma cacao
Thecc1EG016646 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33809616-33810115 Theobroma cacao
Thecc1EG016646 0.5kb downstream 0.5kb downstream 4419 true scaffold_3: 33810116-33814534 Theobroma cacao
Thecc1EG016646 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33814035-33814534 Theobroma cacao
Thecc1EG016646 1.0kb upstream 1.0kb upstream 4919 true scaffold_3: 33809116-33814034 Theobroma cacao
Thecc1EG016646 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33809116-33810115 Theobroma cacao
Thecc1EG016646 1.0kb downstream 1.0kb downstream 4919 true scaffold_3: 33810116-33815034 Theobroma cacao
Thecc1EG016646 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33814035-33815034 Theobroma cacao
Thecc1EG016646 2.0kb upstream 2.0kb upstream 5919 true scaffold_3: 33808116-33814034 Theobroma cacao
Thecc1EG016646 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33808116-33810115 Theobroma cacao
Thecc1EG016646 2.0kb downstream 2.0kb downstream 5919 true scaffold_3: 33810116-33816034 Theobroma cacao
Thecc1EG016646 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33814035-33816034 Theobroma cacao
Thecc1EG016646 5.0kb upstream 5.0kb upstream 8919 true scaffold_3: 33805116-33814034 Theobroma cacao
Thecc1EG016646 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33805116-33810115 Theobroma cacao
Thecc1EG016646 5.0kb downstream 5.0kb downstream 8919 true scaffold_3: 33810116-33819034 Theobroma cacao
Thecc1EG016646 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33814035-33819034 Theobroma cacao
Thecc1EG016646 10.0kb upstream 10.0kb upstream 13919 true scaffold_3: 33800116-33814034 Theobroma cacao
Thecc1EG016646 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33800116-33810115 Theobroma cacao
Thecc1EG016646 10.0kb downstream 10.0kb downstream 13919 true scaffold_3: 33810116-33824034 Theobroma cacao
Thecc1EG016646 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33814035-33824034 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828138 5264 Brassicales-Malvales View MSA
124340056 5266 SBM View MSA
124243659 5268 Malvidae View MSA
124062284 5270 Rosid View MSA
123738174 5271 Pentapetalae View MSA
122791869 5272 Eudicot View MSA
122047317 5273 Angiosperm View MSA
121346816 5274 Embryophyte View MSA
123428327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain