Gene : Thecc1EG016641 T. cacao v1.1
Defline:  (1 of 2) PTHR13018//PTHR13018:SF47 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  3089
Name:  ? Thecc1EG016641 Secondary Identifier:  ? PAC:27449068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016641 0.5kb upstream 0.5kb upstream 9435 true scaffold_3: 33781938-33791372 Theobroma cacao
Thecc1EG016641 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33790873-33791372 Theobroma cacao
Thecc1EG016641 0.5kb downstream 0.5kb downstream 9435 true scaffold_3: 33781438-33790872 Theobroma cacao
Thecc1EG016641 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33781438-33781937 Theobroma cacao
Thecc1EG016641 1.0kb upstream 1.0kb upstream 9935 true scaffold_3: 33781938-33791872 Theobroma cacao
Thecc1EG016641 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33790873-33791872 Theobroma cacao
Thecc1EG016641 1.0kb downstream 1.0kb downstream 9935 true scaffold_3: 33780938-33790872 Theobroma cacao
Thecc1EG016641 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33780938-33781937 Theobroma cacao
Thecc1EG016641 2.0kb upstream 2.0kb upstream 10935 true scaffold_3: 33781938-33792872 Theobroma cacao
Thecc1EG016641 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33790873-33792872 Theobroma cacao
Thecc1EG016641 2.0kb downstream 2.0kb downstream 10935 true scaffold_3: 33779938-33790872 Theobroma cacao
Thecc1EG016641 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33779938-33781937 Theobroma cacao
Thecc1EG016641 5.0kb upstream 5.0kb upstream 13935 true scaffold_3: 33781938-33795872 Theobroma cacao
Thecc1EG016641 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33790873-33795872 Theobroma cacao
Thecc1EG016641 5.0kb downstream 5.0kb downstream 13935 true scaffold_3: 33776938-33790872 Theobroma cacao
Thecc1EG016641 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33776938-33781937 Theobroma cacao
Thecc1EG016641 10.0kb upstream 10.0kb upstream 18935 true scaffold_3: 33781938-33800872 Theobroma cacao
Thecc1EG016641 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33790873-33800872 Theobroma cacao
Thecc1EG016641 10.0kb downstream 10.0kb downstream 18935 true scaffold_3: 33771938-33790872 Theobroma cacao
Thecc1EG016641 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33771938-33781937 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831066 5264 Brassicales-Malvales View MSA
124339664 5266 SBM View MSA
124239408 5268 Malvidae View MSA
124064866 5270 Rosid View MSA
123745735 5271 Pentapetalae View MSA
122788976 5272 Eudicot View MSA
122046937 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain