Gene : Thecc1EG016647 T. cacao v1.1
Defline:  (1 of 1) PTHR31499:SF5 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  3093
Name:  ? Thecc1EG016647 Secondary Identifier:  ? PAC:27450555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016647 0.5kb upstream 0.5kb upstream 2895 true scaffold_3: 33814164-33817058 Theobroma cacao
Thecc1EG016647 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33814164-33814663 Theobroma cacao
Thecc1EG016647 0.5kb downstream 0.5kb downstream 2895 true scaffold_3: 33814664-33817558 Theobroma cacao
Thecc1EG016647 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33817059-33817558 Theobroma cacao
Thecc1EG016647 1.0kb upstream 1.0kb upstream 3395 true scaffold_3: 33813664-33817058 Theobroma cacao
Thecc1EG016647 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33813664-33814663 Theobroma cacao
Thecc1EG016647 1.0kb downstream 1.0kb downstream 3395 true scaffold_3: 33814664-33818058 Theobroma cacao
Thecc1EG016647 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33817059-33818058 Theobroma cacao
Thecc1EG016647 2.0kb upstream 2.0kb upstream 4395 true scaffold_3: 33812664-33817058 Theobroma cacao
Thecc1EG016647 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33812664-33814663 Theobroma cacao
Thecc1EG016647 2.0kb downstream 2.0kb downstream 4395 true scaffold_3: 33814664-33819058 Theobroma cacao
Thecc1EG016647 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33817059-33819058 Theobroma cacao
Thecc1EG016647 5.0kb upstream 5.0kb upstream 7395 true scaffold_3: 33809664-33817058 Theobroma cacao
Thecc1EG016647 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33809664-33814663 Theobroma cacao
Thecc1EG016647 5.0kb downstream 5.0kb downstream 7395 true scaffold_3: 33814664-33822058 Theobroma cacao
Thecc1EG016647 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33817059-33822058 Theobroma cacao
Thecc1EG016647 10.0kb upstream 10.0kb upstream 12395 true scaffold_3: 33804664-33817058 Theobroma cacao
Thecc1EG016647 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33804664-33814663 Theobroma cacao
Thecc1EG016647 10.0kb downstream 10.0kb downstream 12395 true scaffold_3: 33814664-33827058 Theobroma cacao
Thecc1EG016647 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33817059-33827058 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831031 5264 Brassicales-Malvales View MSA
124340713 5266 SBM View MSA
124241585 5268 Malvidae View MSA
124073439 5270 Rosid View MSA
123741048 5271 Pentapetalae View MSA
122787904 5272 Eudicot View MSA
122042666 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain