Gene : Thecc1EG016613 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  3064
Name:  ? Thecc1EG016613 Secondary Identifier:  ? PAC:27451104
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016613 0.5kb upstream 0.5kb upstream 3995 true scaffold_3: 33647907-33651901 Theobroma cacao
Thecc1EG016613 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33651402-33651901 Theobroma cacao
Thecc1EG016613 0.5kb downstream 0.5kb downstream 3995 true scaffold_3: 33647407-33651401 Theobroma cacao
Thecc1EG016613 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33647407-33647906 Theobroma cacao
Thecc1EG016613 1.0kb upstream 1.0kb upstream 4495 true scaffold_3: 33647907-33652401 Theobroma cacao
Thecc1EG016613 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33651402-33652401 Theobroma cacao
Thecc1EG016613 1.0kb downstream 1.0kb downstream 4495 true scaffold_3: 33646907-33651401 Theobroma cacao
Thecc1EG016613 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33646907-33647906 Theobroma cacao
Thecc1EG016613 2.0kb upstream 2.0kb upstream 5495 true scaffold_3: 33647907-33653401 Theobroma cacao
Thecc1EG016613 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33651402-33653401 Theobroma cacao
Thecc1EG016613 2.0kb downstream 2.0kb downstream 5495 true scaffold_3: 33645907-33651401 Theobroma cacao
Thecc1EG016613 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33645907-33647906 Theobroma cacao
Thecc1EG016613 5.0kb upstream 5.0kb upstream 8495 true scaffold_3: 33647907-33656401 Theobroma cacao
Thecc1EG016613 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33651402-33656401 Theobroma cacao
Thecc1EG016613 5.0kb downstream 5.0kb downstream 8495 true scaffold_3: 33642907-33651401 Theobroma cacao
Thecc1EG016613 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33642907-33647906 Theobroma cacao
Thecc1EG016613 10.0kb upstream 10.0kb upstream 13495 true scaffold_3: 33647907-33661401 Theobroma cacao
Thecc1EG016613 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33651402-33661401 Theobroma cacao
Thecc1EG016613 10.0kb downstream 10.0kb downstream 13495 true scaffold_3: 33637907-33651401 Theobroma cacao
Thecc1EG016613 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33637907-33647906 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833353 5264 Brassicales-Malvales View MSA
124338635 5266 SBM View MSA
124239171 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain