Gene : Thecc1EG016606 T. cacao v1.1
Defline:  (1 of 1) PTHR22952:SF47 - BASIC LEUCINE ZIPPER 1-RELATED Genomic Order:  3057
Name:  ? Thecc1EG016606 Secondary Identifier:  ? PAC:27450341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016606 0.5kb upstream 0.5kb upstream 6968 true scaffold_3: 33613142-33620109 Theobroma cacao
Thecc1EG016606 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33619610-33620109 Theobroma cacao
Thecc1EG016606 0.5kb downstream 0.5kb downstream 6968 true scaffold_3: 33612642-33619609 Theobroma cacao
Thecc1EG016606 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33612642-33613141 Theobroma cacao
Thecc1EG016606 1.0kb upstream 1.0kb upstream 7468 true scaffold_3: 33613142-33620609 Theobroma cacao
Thecc1EG016606 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33619610-33620609 Theobroma cacao
Thecc1EG016606 1.0kb downstream 1.0kb downstream 7468 true scaffold_3: 33612142-33619609 Theobroma cacao
Thecc1EG016606 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33612142-33613141 Theobroma cacao
Thecc1EG016606 2.0kb upstream 2.0kb upstream 8468 true scaffold_3: 33613142-33621609 Theobroma cacao
Thecc1EG016606 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33619610-33621609 Theobroma cacao
Thecc1EG016606 2.0kb downstream 2.0kb downstream 8468 true scaffold_3: 33611142-33619609 Theobroma cacao
Thecc1EG016606 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33611142-33613141 Theobroma cacao
Thecc1EG016606 5.0kb upstream 5.0kb upstream 11468 true scaffold_3: 33613142-33624609 Theobroma cacao
Thecc1EG016606 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33619610-33624609 Theobroma cacao
Thecc1EG016606 5.0kb downstream 5.0kb downstream 11468 true scaffold_3: 33608142-33619609 Theobroma cacao
Thecc1EG016606 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33608142-33613141 Theobroma cacao
Thecc1EG016606 10.0kb upstream 10.0kb upstream 16468 true scaffold_3: 33613142-33629609 Theobroma cacao
Thecc1EG016606 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33619610-33629609 Theobroma cacao
Thecc1EG016606 10.0kb downstream 10.0kb downstream 16468 true scaffold_3: 33603142-33619609 Theobroma cacao
Thecc1EG016606 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33603142-33613141 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832574 5264 Brassicales-Malvales View MSA
124343577 5266 SBM View MSA
124238814 5268 Malvidae View MSA
124060566 5270 Rosid View MSA
123744057 5271 Pentapetalae View MSA
122787821 5272 Eudicot View MSA
122047221 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121351466 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain