Gene : Thecc1EG016607 T. cacao v1.1

Defline:  (1 of 5) PTHR24078//PTHR24078:SF193 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HOMOLOG SUBFAMILY C MEMBER 2 Genomic Order:  3058
Name:  ? Thecc1EG016607 Secondary Identifier:  ? PAC:27449341

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016607 0.5kb upstream 0.5kb upstream 3486 true scaffold_3: 33621905-33625390 Theobroma cacao
Thecc1EG016607 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33621905-33622404 Theobroma cacao
Thecc1EG016607 0.5kb downstream 0.5kb downstream 3486 true scaffold_3: 33622405-33625890 Theobroma cacao
Thecc1EG016607 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33625391-33625890 Theobroma cacao
Thecc1EG016607 1.0kb upstream 1.0kb upstream 3986 true scaffold_3: 33621405-33625390 Theobroma cacao
Thecc1EG016607 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33621405-33622404 Theobroma cacao
Thecc1EG016607 1.0kb downstream 1.0kb downstream 3986 true scaffold_3: 33622405-33626390 Theobroma cacao
Thecc1EG016607 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33625391-33626390 Theobroma cacao
Thecc1EG016607 2.0kb upstream 2.0kb upstream 4986 true scaffold_3: 33620405-33625390 Theobroma cacao
Thecc1EG016607 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33620405-33622404 Theobroma cacao
Thecc1EG016607 2.0kb downstream 2.0kb downstream 4986 true scaffold_3: 33622405-33627390 Theobroma cacao
Thecc1EG016607 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33625391-33627390 Theobroma cacao
Thecc1EG016607 5.0kb upstream 5.0kb upstream 7986 true scaffold_3: 33617405-33625390 Theobroma cacao
Thecc1EG016607 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33617405-33622404 Theobroma cacao
Thecc1EG016607 5.0kb downstream 5.0kb downstream 7986 true scaffold_3: 33622405-33630390 Theobroma cacao
Thecc1EG016607 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33625391-33630390 Theobroma cacao
Thecc1EG016607 10.0kb upstream 10.0kb upstream 12986 true scaffold_3: 33612405-33625390 Theobroma cacao
Thecc1EG016607 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33612405-33622404 Theobroma cacao
Thecc1EG016607 10.0kb downstream 10.0kb downstream 12986 true scaffold_3: 33622405-33635390 Theobroma cacao
Thecc1EG016607 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33625391-33635390 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840156 5264 Brassicales-Malvales View MSA
124345224 5266 SBM View MSA
124242190 5268 Malvidae View MSA
124068520 5270 Rosid View MSA
123753293 5271 Pentapetalae View MSA
122794743 5272 Eudicot View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain