Gene : Thecc1EG016612 T. cacao v1.1
Defline:  (1 of 1) 2.7.4.2 - Phosphomevalonate kinase Genomic Order:  3063
Name:  ? Thecc1EG016612 Secondary Identifier:  ? PAC:27446974
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5910 Theobroma cacao pathologic  
Tcacao PWY-922 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016612 0.5kb upstream 0.5kb upstream 5760 true scaffold_3: 33641831-33647590 Theobroma cacao
Thecc1EG016612 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33641831-33642330 Theobroma cacao
Thecc1EG016612 0.5kb downstream 0.5kb downstream 5760 true scaffold_3: 33642331-33648090 Theobroma cacao
Thecc1EG016612 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33647591-33648090 Theobroma cacao
Thecc1EG016612 1.0kb upstream 1.0kb upstream 6260 true scaffold_3: 33641331-33647590 Theobroma cacao
Thecc1EG016612 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33641331-33642330 Theobroma cacao
Thecc1EG016612 1.0kb downstream 1.0kb downstream 6260 true scaffold_3: 33642331-33648590 Theobroma cacao
Thecc1EG016612 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33647591-33648590 Theobroma cacao
Thecc1EG016612 2.0kb upstream 2.0kb upstream 7260 true scaffold_3: 33640331-33647590 Theobroma cacao
Thecc1EG016612 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33640331-33642330 Theobroma cacao
Thecc1EG016612 2.0kb downstream 2.0kb downstream 7260 true scaffold_3: 33642331-33649590 Theobroma cacao
Thecc1EG016612 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33647591-33649590 Theobroma cacao
Thecc1EG016612 5.0kb upstream 5.0kb upstream 10260 true scaffold_3: 33637331-33647590 Theobroma cacao
Thecc1EG016612 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33637331-33642330 Theobroma cacao
Thecc1EG016612 5.0kb downstream 5.0kb downstream 10260 true scaffold_3: 33642331-33652590 Theobroma cacao
Thecc1EG016612 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33647591-33652590 Theobroma cacao
Thecc1EG016612 10.0kb upstream 10.0kb upstream 15260 true scaffold_3: 33632331-33647590 Theobroma cacao
Thecc1EG016612 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33632331-33642330 Theobroma cacao
Thecc1EG016612 10.0kb downstream 10.0kb downstream 15260 true scaffold_3: 33642331-33657590 Theobroma cacao
Thecc1EG016612 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33647591-33657590 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834522 5264 Brassicales-Malvales View MSA
124336505 5266 SBM View MSA
124239577 5268 Malvidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain