Gene : Thecc1EG016600 T. cacao v1.1
Defline:  (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1) Genomic Order:  3051
Name:  ? Thecc1EG016600 Secondary Identifier:  ? PAC:27447028
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1319 Theobroma cacao pathologic  
Tcacao PWY4FS-7 Theobroma cacao pathologic  
Tcacao PWY-7411 Theobroma cacao pathologic  
Tcacao TRIGLSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016600 0.5kb upstream 0.5kb upstream 8645 true scaffold_3: 33574781-33583425 Theobroma cacao
Thecc1EG016600 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33574781-33575280 Theobroma cacao
Thecc1EG016600 0.5kb downstream 0.5kb downstream 8645 true scaffold_3: 33575281-33583925 Theobroma cacao
Thecc1EG016600 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33583426-33583925 Theobroma cacao
Thecc1EG016600 1.0kb upstream 1.0kb upstream 9145 true scaffold_3: 33574281-33583425 Theobroma cacao
Thecc1EG016600 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33574281-33575280 Theobroma cacao
Thecc1EG016600 1.0kb downstream 1.0kb downstream 9145 true scaffold_3: 33575281-33584425 Theobroma cacao
Thecc1EG016600 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33583426-33584425 Theobroma cacao
Thecc1EG016600 2.0kb upstream 2.0kb upstream 10145 true scaffold_3: 33573281-33583425 Theobroma cacao
Thecc1EG016600 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33573281-33575280 Theobroma cacao
Thecc1EG016600 2.0kb downstream 2.0kb downstream 10145 true scaffold_3: 33575281-33585425 Theobroma cacao
Thecc1EG016600 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33583426-33585425 Theobroma cacao
Thecc1EG016600 5.0kb upstream 5.0kb upstream 13145 true scaffold_3: 33570281-33583425 Theobroma cacao
Thecc1EG016600 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33570281-33575280 Theobroma cacao
Thecc1EG016600 5.0kb downstream 5.0kb downstream 13145 true scaffold_3: 33575281-33588425 Theobroma cacao
Thecc1EG016600 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33583426-33588425 Theobroma cacao
Thecc1EG016600 10.0kb upstream 10.0kb upstream 18145 true scaffold_3: 33565281-33583425 Theobroma cacao
Thecc1EG016600 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33565281-33575280 Theobroma cacao
Thecc1EG016600 10.0kb downstream 10.0kb downstream 18145 true scaffold_3: 33575281-33593425 Theobroma cacao
Thecc1EG016600 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33583426-33593425 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840834 5264 Brassicales-Malvales View MSA
124339399 5266 SBM View MSA
124237603 5268 Malvidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain