Gene : Thecc1EG016599 T. cacao v1.1
Defline:  (1 of 1) K12668 - oligosaccharyltransferase complex subunit epsilon (OST2, DAD1) Genomic Order:  3050
Name:  ? Thecc1EG016599 Secondary Identifier:  ? PAC:27448183
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016599 0.5kb upstream 0.5kb upstream 2423 true scaffold_3: 33571252-33573674 Theobroma cacao
Thecc1EG016599 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33571252-33571751 Theobroma cacao
Thecc1EG016599 0.5kb downstream 0.5kb downstream 2423 true scaffold_3: 33571752-33574174 Theobroma cacao
Thecc1EG016599 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33573675-33574174 Theobroma cacao
Thecc1EG016599 1.0kb upstream 1.0kb upstream 2923 true scaffold_3: 33570752-33573674 Theobroma cacao
Thecc1EG016599 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33570752-33571751 Theobroma cacao
Thecc1EG016599 1.0kb downstream 1.0kb downstream 2923 true scaffold_3: 33571752-33574674 Theobroma cacao
Thecc1EG016599 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33573675-33574674 Theobroma cacao
Thecc1EG016599 2.0kb upstream 2.0kb upstream 3923 true scaffold_3: 33569752-33573674 Theobroma cacao
Thecc1EG016599 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33569752-33571751 Theobroma cacao
Thecc1EG016599 2.0kb downstream 2.0kb downstream 3923 true scaffold_3: 33571752-33575674 Theobroma cacao
Thecc1EG016599 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33573675-33575674 Theobroma cacao
Thecc1EG016599 5.0kb upstream 5.0kb upstream 6923 true scaffold_3: 33566752-33573674 Theobroma cacao
Thecc1EG016599 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33566752-33571751 Theobroma cacao
Thecc1EG016599 5.0kb downstream 5.0kb downstream 6923 true scaffold_3: 33571752-33578674 Theobroma cacao
Thecc1EG016599 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33573675-33578674 Theobroma cacao
Thecc1EG016599 10.0kb upstream 10.0kb upstream 11923 true scaffold_3: 33561752-33573674 Theobroma cacao
Thecc1EG016599 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33561752-33571751 Theobroma cacao
Thecc1EG016599 10.0kb downstream 10.0kb downstream 11923 true scaffold_3: 33571752-33583674 Theobroma cacao
Thecc1EG016599 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33573675-33583674 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837119 5264 Brassicales-Malvales View MSA
124341057 5266 SBM View MSA
124239308 5268 Malvidae View MSA
124061217 5270 Rosid View MSA
123742864 5271 Pentapetalae View MSA
122792667 5272 Eudicot View MSA
122049085 5273 Angiosperm View MSA
121345892 5274 Embryophyte View MSA
123425631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain