Gene : Thecc1EG016604 T. cacao v1.1
Defline:  (1 of 6) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  3055
Name:  ? Thecc1EG016604 Secondary Identifier:  ? PAC:27449004
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016604 0.5kb upstream 0.5kb upstream 4134 true scaffold_3: 33609028-33613161 Theobroma cacao
Thecc1EG016604 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33612662-33613161 Theobroma cacao
Thecc1EG016604 0.5kb downstream 0.5kb downstream 4134 true scaffold_3: 33608528-33612661 Theobroma cacao
Thecc1EG016604 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33608528-33609027 Theobroma cacao
Thecc1EG016604 1.0kb upstream 1.0kb upstream 4634 true scaffold_3: 33609028-33613661 Theobroma cacao
Thecc1EG016604 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33612662-33613661 Theobroma cacao
Thecc1EG016604 1.0kb downstream 1.0kb downstream 4634 true scaffold_3: 33608028-33612661 Theobroma cacao
Thecc1EG016604 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33608028-33609027 Theobroma cacao
Thecc1EG016604 2.0kb upstream 2.0kb upstream 5634 true scaffold_3: 33609028-33614661 Theobroma cacao
Thecc1EG016604 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33612662-33614661 Theobroma cacao
Thecc1EG016604 2.0kb downstream 2.0kb downstream 5634 true scaffold_3: 33607028-33612661 Theobroma cacao
Thecc1EG016604 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33607028-33609027 Theobroma cacao
Thecc1EG016604 5.0kb upstream 5.0kb upstream 8634 true scaffold_3: 33609028-33617661 Theobroma cacao
Thecc1EG016604 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33612662-33617661 Theobroma cacao
Thecc1EG016604 5.0kb downstream 5.0kb downstream 8634 true scaffold_3: 33604028-33612661 Theobroma cacao
Thecc1EG016604 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33604028-33609027 Theobroma cacao
Thecc1EG016604 10.0kb upstream 10.0kb upstream 13634 true scaffold_3: 33609028-33622661 Theobroma cacao
Thecc1EG016604 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33612662-33622661 Theobroma cacao
Thecc1EG016604 10.0kb downstream 10.0kb downstream 13634 true scaffold_3: 33599028-33612661 Theobroma cacao
Thecc1EG016604 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33599028-33609027 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830795 5264 Brassicales-Malvales View MSA
124321693 5266 SBM View MSA
124241715 5268 Malvidae View MSA
124061893 5270 Rosid View MSA
123739259 5271 Pentapetalae View MSA
122793011 5272 Eudicot View MSA
122047188 5273 Angiosperm View MSA
121310700 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain