Gene : Thecc1EG016582 T. cacao v1.1
Defline:  (1 of 8) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) Genomic Order:  3038
Name:  ? Thecc1EG016582 Secondary Identifier:  ? PAC:27447559
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016582 0.5kb upstream 0.5kb upstream 6281 true scaffold_3: 33494423-33500703 Theobroma cacao
Thecc1EG016582 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33494423-33494922 Theobroma cacao
Thecc1EG016582 0.5kb downstream 0.5kb downstream 6281 true scaffold_3: 33494923-33501203 Theobroma cacao
Thecc1EG016582 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33500704-33501203 Theobroma cacao
Thecc1EG016582 1.0kb upstream 1.0kb upstream 6781 true scaffold_3: 33493923-33500703 Theobroma cacao
Thecc1EG016582 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33493923-33494922 Theobroma cacao
Thecc1EG016582 1.0kb downstream 1.0kb downstream 6781 true scaffold_3: 33494923-33501703 Theobroma cacao
Thecc1EG016582 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33500704-33501703 Theobroma cacao
Thecc1EG016582 2.0kb upstream 2.0kb upstream 7781 true scaffold_3: 33492923-33500703 Theobroma cacao
Thecc1EG016582 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33492923-33494922 Theobroma cacao
Thecc1EG016582 2.0kb downstream 2.0kb downstream 7781 true scaffold_3: 33494923-33502703 Theobroma cacao
Thecc1EG016582 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33500704-33502703 Theobroma cacao
Thecc1EG016582 5.0kb upstream 5.0kb upstream 10781 true scaffold_3: 33489923-33500703 Theobroma cacao
Thecc1EG016582 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33489923-33494922 Theobroma cacao
Thecc1EG016582 5.0kb downstream 5.0kb downstream 10781 true scaffold_3: 33494923-33505703 Theobroma cacao
Thecc1EG016582 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33500704-33505703 Theobroma cacao
Thecc1EG016582 10.0kb upstream 10.0kb upstream 15781 true scaffold_3: 33484923-33500703 Theobroma cacao
Thecc1EG016582 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33484923-33494922 Theobroma cacao
Thecc1EG016582 10.0kb downstream 10.0kb downstream 15781 true scaffold_3: 33494923-33510703 Theobroma cacao
Thecc1EG016582 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33500704-33510703 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829065 5264 Brassicales-Malvales View MSA
124343768 5266 SBM View MSA
124237830 5268 Malvidae View MSA
124065425 5270 Rosid View MSA
123738809 5271 Pentapetalae View MSA
122790859 5272 Eudicot View MSA
122045616 5273 Angiosperm View MSA
121310473 5274 Embryophyte View MSA
123347945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain