Gene : Thecc1EG016579 T. cacao v1.1
Defline:  (1 of 1) PTHR10891:SF290 - CALCIUM-BINDING PROTEIN CML18-RELATED Genomic Order:  3035
Name:  ? Thecc1EG016579 Secondary Identifier:  ? PAC:27447169
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016579 0.5kb upstream 0.5kb upstream 1460 true scaffold_3: 33486411-33487870 Theobroma cacao
Thecc1EG016579 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33487371-33487870 Theobroma cacao
Thecc1EG016579 0.5kb downstream 0.5kb downstream 1460 true scaffold_3: 33485911-33487370 Theobroma cacao
Thecc1EG016579 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33485911-33486410 Theobroma cacao
Thecc1EG016579 1.0kb upstream 1.0kb upstream 1960 true scaffold_3: 33486411-33488370 Theobroma cacao
Thecc1EG016579 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33487371-33488370 Theobroma cacao
Thecc1EG016579 1.0kb downstream 1.0kb downstream 1960 true scaffold_3: 33485411-33487370 Theobroma cacao
Thecc1EG016579 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33485411-33486410 Theobroma cacao
Thecc1EG016579 2.0kb upstream 2.0kb upstream 2960 true scaffold_3: 33486411-33489370 Theobroma cacao
Thecc1EG016579 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33487371-33489370 Theobroma cacao
Thecc1EG016579 2.0kb downstream 2.0kb downstream 2960 true scaffold_3: 33484411-33487370 Theobroma cacao
Thecc1EG016579 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33484411-33486410 Theobroma cacao
Thecc1EG016579 5.0kb upstream 5.0kb upstream 5960 true scaffold_3: 33486411-33492370 Theobroma cacao
Thecc1EG016579 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33487371-33492370 Theobroma cacao
Thecc1EG016579 5.0kb downstream 5.0kb downstream 5960 true scaffold_3: 33481411-33487370 Theobroma cacao
Thecc1EG016579 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33481411-33486410 Theobroma cacao
Thecc1EG016579 10.0kb upstream 10.0kb upstream 10960 true scaffold_3: 33486411-33497370 Theobroma cacao
Thecc1EG016579 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33487371-33497370 Theobroma cacao
Thecc1EG016579 10.0kb downstream 10.0kb downstream 10960 true scaffold_3: 33476411-33487370 Theobroma cacao
Thecc1EG016579 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33476411-33486410 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834387 5264 Brassicales-Malvales View MSA
124337879 5266 SBM View MSA
124239307 5268 Malvidae View MSA
124071205 5270 Rosid View MSA
123741143 5271 Pentapetalae View MSA
122785978 5272 Eudicot View MSA
122047727 5273 Angiosperm View MSA
121350745 5274 Embryophyte View MSA
123381869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain