Gene : Thecc1EG016543 T. cacao v1.1
Defline:  (1 of 8) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  3002
Name:  ? Thecc1EG016543 Secondary Identifier:  ? PAC:27448286
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5080 Theobroma cacao pathologic  
Tcacao PWY-6433 Theobroma cacao pathologic  
Tcacao PWY-6598 Theobroma cacao pathologic  
Tcacao PWY-7036 Theobroma cacao pathologic  
Tcacao PWY-7601 Theobroma cacao pathologic  
Tcacao PWY-7606 Theobroma cacao pathologic  
Tcacao PWY-7619 Theobroma cacao pathologic  
Tcacao PWY-7726 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016543 0.5kb upstream 0.5kb upstream 3038 true scaffold_3: 33361093-33364130 Theobroma cacao
Thecc1EG016543 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33361093-33361592 Theobroma cacao
Thecc1EG016543 0.5kb downstream 0.5kb downstream 3038 true scaffold_3: 33361593-33364630 Theobroma cacao
Thecc1EG016543 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33364131-33364630 Theobroma cacao
Thecc1EG016543 1.0kb upstream 1.0kb upstream 3538 true scaffold_3: 33360593-33364130 Theobroma cacao
Thecc1EG016543 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33360593-33361592 Theobroma cacao
Thecc1EG016543 1.0kb downstream 1.0kb downstream 3538 true scaffold_3: 33361593-33365130 Theobroma cacao
Thecc1EG016543 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33364131-33365130 Theobroma cacao
Thecc1EG016543 2.0kb upstream 2.0kb upstream 4538 true scaffold_3: 33359593-33364130 Theobroma cacao
Thecc1EG016543 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33359593-33361592 Theobroma cacao
Thecc1EG016543 2.0kb downstream 2.0kb downstream 4538 true scaffold_3: 33361593-33366130 Theobroma cacao
Thecc1EG016543 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33364131-33366130 Theobroma cacao
Thecc1EG016543 5.0kb upstream 5.0kb upstream 7538 true scaffold_3: 33356593-33364130 Theobroma cacao
Thecc1EG016543 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33356593-33361592 Theobroma cacao
Thecc1EG016543 5.0kb downstream 5.0kb downstream 7538 true scaffold_3: 33361593-33369130 Theobroma cacao
Thecc1EG016543 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33364131-33369130 Theobroma cacao
Thecc1EG016543 10.0kb upstream 10.0kb upstream 12538 true scaffold_3: 33351593-33364130 Theobroma cacao
Thecc1EG016543 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33351593-33361592 Theobroma cacao
Thecc1EG016543 10.0kb downstream 10.0kb downstream 12538 true scaffold_3: 33361593-33374130 Theobroma cacao
Thecc1EG016543 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33364131-33374130 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831890 5264 Brassicales-Malvales View MSA
124336422 5266 SBM View MSA
124243472 5268 Malvidae View MSA
124064586 5270 Rosid View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain