Gene : Thecc1EG047027 T. cacao v1.1
Defline:  (1 of 2) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  2955
Name:  ? Thecc1EG047027 Secondary Identifier:  ? PAC:27448210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047027 0.5kb upstream 0.5kb upstream 4817 true scaffold_3: 33102737-33107553 Theobroma cacao
Thecc1EG047027 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33102737-33103236 Theobroma cacao
Thecc1EG047027 0.5kb downstream 0.5kb downstream 4817 true scaffold_3: 33103237-33108053 Theobroma cacao
Thecc1EG047027 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33107554-33108053 Theobroma cacao
Thecc1EG047027 1.0kb upstream 1.0kb upstream 5317 true scaffold_3: 33102237-33107553 Theobroma cacao
Thecc1EG047027 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33102237-33103236 Theobroma cacao
Thecc1EG047027 1.0kb downstream 1.0kb downstream 5317 true scaffold_3: 33103237-33108553 Theobroma cacao
Thecc1EG047027 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33107554-33108553 Theobroma cacao
Thecc1EG047027 2.0kb upstream 2.0kb upstream 6317 true scaffold_3: 33101237-33107553 Theobroma cacao
Thecc1EG047027 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33101237-33103236 Theobroma cacao
Thecc1EG047027 2.0kb downstream 2.0kb downstream 6317 true scaffold_3: 33103237-33109553 Theobroma cacao
Thecc1EG047027 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33107554-33109553 Theobroma cacao
Thecc1EG047027 5.0kb upstream 5.0kb upstream 9317 true scaffold_3: 33098237-33107553 Theobroma cacao
Thecc1EG047027 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33098237-33103236 Theobroma cacao
Thecc1EG047027 5.0kb downstream 5.0kb downstream 9317 true scaffold_3: 33103237-33112553 Theobroma cacao
Thecc1EG047027 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33107554-33112553 Theobroma cacao
Thecc1EG047027 10.0kb upstream 10.0kb upstream 14317 true scaffold_3: 33093237-33107553 Theobroma cacao
Thecc1EG047027 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33093237-33103236 Theobroma cacao
Thecc1EG047027 10.0kb downstream 10.0kb downstream 14317 true scaffold_3: 33103237-33117553 Theobroma cacao
Thecc1EG047027 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33107554-33117553 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828986 5264 Brassicales-Malvales View MSA
124321568 5266 SBM View MSA
124241982 5268 Malvidae View MSA
124066197 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain