Gene : Thecc1EG047020 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2598
Name:  ? Thecc1EG047020 Secondary Identifier:  ? PAC:27447923
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047020 0.5kb upstream 0.5kb upstream 4091 true scaffold_3: 31252219-31256309 Theobroma cacao
Thecc1EG047020 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31252219-31252718 Theobroma cacao
Thecc1EG047020 0.5kb downstream 0.5kb downstream 4091 true scaffold_3: 31252719-31256809 Theobroma cacao
Thecc1EG047020 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31256310-31256809 Theobroma cacao
Thecc1EG047020 1.0kb upstream 1.0kb upstream 4591 true scaffold_3: 31251719-31256309 Theobroma cacao
Thecc1EG047020 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31251719-31252718 Theobroma cacao
Thecc1EG047020 1.0kb downstream 1.0kb downstream 4591 true scaffold_3: 31252719-31257309 Theobroma cacao
Thecc1EG047020 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31256310-31257309 Theobroma cacao
Thecc1EG047020 2.0kb upstream 2.0kb upstream 5591 true scaffold_3: 31250719-31256309 Theobroma cacao
Thecc1EG047020 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31250719-31252718 Theobroma cacao
Thecc1EG047020 2.0kb downstream 2.0kb downstream 5591 true scaffold_3: 31252719-31258309 Theobroma cacao
Thecc1EG047020 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31256310-31258309 Theobroma cacao
Thecc1EG047020 5.0kb upstream 5.0kb upstream 8591 true scaffold_3: 31247719-31256309 Theobroma cacao
Thecc1EG047020 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31247719-31252718 Theobroma cacao
Thecc1EG047020 5.0kb downstream 5.0kb downstream 8591 true scaffold_3: 31252719-31261309 Theobroma cacao
Thecc1EG047020 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31256310-31261309 Theobroma cacao
Thecc1EG047020 10.0kb upstream 10.0kb upstream 13591 true scaffold_3: 31242719-31256309 Theobroma cacao
Thecc1EG047020 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31242719-31252718 Theobroma cacao
Thecc1EG047020 10.0kb downstream 10.0kb downstream 13591 true scaffold_3: 31252719-31266309 Theobroma cacao
Thecc1EG047020 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31256310-31266309 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827473 5264 Brassicales-Malvales View MSA
124321465 5266 SBM View MSA
124242229 5268 Malvidae View MSA
124069028 5270 Rosid View MSA
123743888 5271 Pentapetalae View MSA
122795257 5272 Eudicot View MSA
122048677 5273 Angiosperm View MSA
121311068 5274 Embryophyte View MSA
123348417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain