Gene : Thecc1EG046738 T. cacao v1.1
Defline:  (1 of 1) K01890 - phenylalanyl-tRNA synthetase beta chain (FARSB, pheT) Genomic Order:  604
Name:  ? Thecc1EG046738 Secondary Identifier:  ? PAC:27450547
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao TRNA-CHARGING-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046738 0.5kb upstream 0.5kb upstream 15675 true scaffold_3: 7516193-7531867 Theobroma cacao
Thecc1EG046738 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7531368-7531867 Theobroma cacao
Thecc1EG046738 0.5kb downstream 0.5kb downstream 15675 true scaffold_3: 7515693-7531367 Theobroma cacao
Thecc1EG046738 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7515693-7516192 Theobroma cacao
Thecc1EG046738 1.0kb upstream 1.0kb upstream 16175 true scaffold_3: 7516193-7532367 Theobroma cacao
Thecc1EG046738 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7531368-7532367 Theobroma cacao
Thecc1EG046738 1.0kb downstream 1.0kb downstream 16175 true scaffold_3: 7515193-7531367 Theobroma cacao
Thecc1EG046738 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7515193-7516192 Theobroma cacao
Thecc1EG046738 2.0kb upstream 2.0kb upstream 17175 true scaffold_3: 7516193-7533367 Theobroma cacao
Thecc1EG046738 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7531368-7533367 Theobroma cacao
Thecc1EG046738 2.0kb downstream 2.0kb downstream 17175 true scaffold_3: 7514193-7531367 Theobroma cacao
Thecc1EG046738 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7514193-7516192 Theobroma cacao
Thecc1EG046738 5.0kb upstream 5.0kb upstream 20175 true scaffold_3: 7516193-7536367 Theobroma cacao
Thecc1EG046738 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7531368-7536367 Theobroma cacao
Thecc1EG046738 5.0kb downstream 5.0kb downstream 20175 true scaffold_3: 7511193-7531367 Theobroma cacao
Thecc1EG046738 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7511193-7516192 Theobroma cacao
Thecc1EG046738 10.0kb upstream 10.0kb upstream 25175 true scaffold_3: 7516193-7541367 Theobroma cacao
Thecc1EG046738 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7531368-7541367 Theobroma cacao
Thecc1EG046738 10.0kb downstream 10.0kb downstream 25175 true scaffold_3: 7506193-7531367 Theobroma cacao
Thecc1EG046738 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7506193-7516192 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834957 5264 Brassicales-Malvales View MSA
124339817 5266 SBM View MSA
124238696 5268 Malvidae View MSA
124062601 5270 Rosid View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain