Gene : Thecc1EG016743 T. cacao v1.1
Defline:  (1 of 1) PTHR10032//PTHR10032:SF204 - ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS // PROTEIN Y5F2A.4 Genomic Order:  3187
Name:  ? Thecc1EG016743 Secondary Identifier:  ? PAC:27449276
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016743 0.5kb upstream 0.5kb upstream 2020 true scaffold_3: 34257772-34259791 Theobroma cacao
Thecc1EG016743 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 34257772-34258271 Theobroma cacao
Thecc1EG016743 0.5kb downstream 0.5kb downstream 2020 true scaffold_3: 34258272-34260291 Theobroma cacao
Thecc1EG016743 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 34259792-34260291 Theobroma cacao
Thecc1EG016743 1.0kb upstream 1.0kb upstream 2520 true scaffold_3: 34257272-34259791 Theobroma cacao
Thecc1EG016743 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 34257272-34258271 Theobroma cacao
Thecc1EG016743 1.0kb downstream 1.0kb downstream 2520 true scaffold_3: 34258272-34260791 Theobroma cacao
Thecc1EG016743 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 34259792-34260791 Theobroma cacao
Thecc1EG016743 2.0kb upstream 2.0kb upstream 3520 true scaffold_3: 34256272-34259791 Theobroma cacao
Thecc1EG016743 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 34256272-34258271 Theobroma cacao
Thecc1EG016743 2.0kb downstream 2.0kb downstream 3520 true scaffold_3: 34258272-34261791 Theobroma cacao
Thecc1EG016743 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 34259792-34261791 Theobroma cacao
Thecc1EG016743 5.0kb upstream 5.0kb upstream 6520 true scaffold_3: 34253272-34259791 Theobroma cacao
Thecc1EG016743 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 34253272-34258271 Theobroma cacao
Thecc1EG016743 5.0kb downstream 5.0kb downstream 6520 true scaffold_3: 34258272-34264791 Theobroma cacao
Thecc1EG016743 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 34259792-34264791 Theobroma cacao
Thecc1EG016743 10.0kb upstream 10.0kb upstream 11520 true scaffold_3: 34248272-34259791 Theobroma cacao
Thecc1EG016743 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 34248272-34258271 Theobroma cacao
Thecc1EG016743 10.0kb downstream 10.0kb downstream 11520 true scaffold_3: 34258272-34269791 Theobroma cacao
Thecc1EG016743 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 34259792-34269791 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825968 5264 Brassicales-Malvales View MSA
124347109 5266 SBM View MSA
124245313 5268 Malvidae View MSA
124069981 5270 Rosid View MSA
123753444 5271 Pentapetalae View MSA
122785862 5272 Eudicot View MSA
122041695 5273 Angiosperm View MSA
121348900 5274 Embryophyte View MSA
123381067 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain