Gene : Thecc1EG016705 T. cacao v1.1
Defline:  (1 of 1) PTHR13586//PTHR13586:SF3 - SCD6 PROTEIN-RELATED // DECAPPING 5-LIKE PROTEIN-RELATED Genomic Order:  3147
Name:  ? Thecc1EG016705 Secondary Identifier:  ? PAC:27448733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016705 0.5kb upstream 0.5kb upstream 6359 true scaffold_3: 34082960-34089318 Theobroma cacao
Thecc1EG016705 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 34082960-34083459 Theobroma cacao
Thecc1EG016705 0.5kb downstream 0.5kb downstream 6359 true scaffold_3: 34083460-34089818 Theobroma cacao
Thecc1EG016705 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 34089319-34089818 Theobroma cacao
Thecc1EG016705 1.0kb upstream 1.0kb upstream 6859 true scaffold_3: 34082460-34089318 Theobroma cacao
Thecc1EG016705 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 34082460-34083459 Theobroma cacao
Thecc1EG016705 1.0kb downstream 1.0kb downstream 6859 true scaffold_3: 34083460-34090318 Theobroma cacao
Thecc1EG016705 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 34089319-34090318 Theobroma cacao
Thecc1EG016705 2.0kb upstream 2.0kb upstream 7859 true scaffold_3: 34081460-34089318 Theobroma cacao
Thecc1EG016705 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 34081460-34083459 Theobroma cacao
Thecc1EG016705 2.0kb downstream 2.0kb downstream 7859 true scaffold_3: 34083460-34091318 Theobroma cacao
Thecc1EG016705 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 34089319-34091318 Theobroma cacao
Thecc1EG016705 5.0kb upstream 5.0kb upstream 10859 true scaffold_3: 34078460-34089318 Theobroma cacao
Thecc1EG016705 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 34078460-34083459 Theobroma cacao
Thecc1EG016705 5.0kb downstream 5.0kb downstream 10859 true scaffold_3: 34083460-34094318 Theobroma cacao
Thecc1EG016705 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 34089319-34094318 Theobroma cacao
Thecc1EG016705 10.0kb upstream 10.0kb upstream 15859 true scaffold_3: 34073460-34089318 Theobroma cacao
Thecc1EG016705 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 34073460-34083459 Theobroma cacao
Thecc1EG016705 10.0kb downstream 10.0kb downstream 15859 true scaffold_3: 34083460-34099318 Theobroma cacao
Thecc1EG016705 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 34089319-34099318 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779803 5273 Angiosperm View MSA
123836911 5264 Brassicales-Malvales View MSA
124346894 5266 SBM View MSA
124245737 5268 Malvidae View MSA
124070995 5270 Rosid View MSA
123744219 5271 Pentapetalae View MSA
122770960 5272 Eudicot View MSA
121051442 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain