Gene : Thecc1EG016702 T. cacao v1.1
Defline:  (1 of 1) PTHR24286//PTHR24286:SF10 - FAMILY NOT NAMED // ABSCISIC ACID 8'-HYDROXYLASE 1-RELATED Genomic Order:  3144
Name:  ? Thecc1EG016702 Secondary Identifier:  ? PAC:27450440
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5271 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016702 0.5kb upstream 0.5kb upstream 4940 true scaffold_3: 34062595-34067534 Theobroma cacao
Thecc1EG016702 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 34062595-34063094 Theobroma cacao
Thecc1EG016702 0.5kb downstream 0.5kb downstream 4940 true scaffold_3: 34063095-34068034 Theobroma cacao
Thecc1EG016702 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 34067535-34068034 Theobroma cacao
Thecc1EG016702 1.0kb upstream 1.0kb upstream 5440 true scaffold_3: 34062095-34067534 Theobroma cacao
Thecc1EG016702 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 34062095-34063094 Theobroma cacao
Thecc1EG016702 1.0kb downstream 1.0kb downstream 5440 true scaffold_3: 34063095-34068534 Theobroma cacao
Thecc1EG016702 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 34067535-34068534 Theobroma cacao
Thecc1EG016702 2.0kb upstream 2.0kb upstream 6440 true scaffold_3: 34061095-34067534 Theobroma cacao
Thecc1EG016702 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 34061095-34063094 Theobroma cacao
Thecc1EG016702 2.0kb downstream 2.0kb downstream 6440 true scaffold_3: 34063095-34069534 Theobroma cacao
Thecc1EG016702 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 34067535-34069534 Theobroma cacao
Thecc1EG016702 5.0kb upstream 5.0kb upstream 9440 true scaffold_3: 34058095-34067534 Theobroma cacao
Thecc1EG016702 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 34058095-34063094 Theobroma cacao
Thecc1EG016702 5.0kb downstream 5.0kb downstream 9440 true scaffold_3: 34063095-34072534 Theobroma cacao
Thecc1EG016702 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 34067535-34072534 Theobroma cacao
Thecc1EG016702 10.0kb upstream 10.0kb upstream 14440 true scaffold_3: 34053095-34067534 Theobroma cacao
Thecc1EG016702 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 34053095-34063094 Theobroma cacao
Thecc1EG016702 10.0kb downstream 10.0kb downstream 14440 true scaffold_3: 34063095-34077534 Theobroma cacao
Thecc1EG016702 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 34067535-34077534 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839116 5264 Brassicales-Malvales View MSA
124341154 5266 SBM View MSA
124251238 5268 Malvidae View MSA
124067549 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain