Gene : Thecc1EG016697 T. cacao v1.1
Defline:  (1 of 1) PTHR22990 - F-BOX ONLY PROTEIN Genomic Order:  3139
Name:  ? Thecc1EG016697 Secondary Identifier:  ? PAC:27450345
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016697 0.5kb upstream 0.5kb upstream 6775 true scaffold_3: 34026010-34032784 Theobroma cacao
Thecc1EG016697 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 34026010-34026509 Theobroma cacao
Thecc1EG016697 0.5kb downstream 0.5kb downstream 6775 true scaffold_3: 34026510-34033284 Theobroma cacao
Thecc1EG016697 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 34032785-34033284 Theobroma cacao
Thecc1EG016697 1.0kb upstream 1.0kb upstream 7275 true scaffold_3: 34025510-34032784 Theobroma cacao
Thecc1EG016697 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 34025510-34026509 Theobroma cacao
Thecc1EG016697 1.0kb downstream 1.0kb downstream 7275 true scaffold_3: 34026510-34033784 Theobroma cacao
Thecc1EG016697 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 34032785-34033784 Theobroma cacao
Thecc1EG016697 2.0kb upstream 2.0kb upstream 8275 true scaffold_3: 34024510-34032784 Theobroma cacao
Thecc1EG016697 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 34024510-34026509 Theobroma cacao
Thecc1EG016697 2.0kb downstream 2.0kb downstream 8275 true scaffold_3: 34026510-34034784 Theobroma cacao
Thecc1EG016697 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 34032785-34034784 Theobroma cacao
Thecc1EG016697 5.0kb upstream 5.0kb upstream 11275 true scaffold_3: 34021510-34032784 Theobroma cacao
Thecc1EG016697 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 34021510-34026509 Theobroma cacao
Thecc1EG016697 5.0kb downstream 5.0kb downstream 11275 true scaffold_3: 34026510-34037784 Theobroma cacao
Thecc1EG016697 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 34032785-34037784 Theobroma cacao
Thecc1EG016697 10.0kb upstream 10.0kb upstream 16275 true scaffold_3: 34016510-34032784 Theobroma cacao
Thecc1EG016697 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 34016510-34026509 Theobroma cacao
Thecc1EG016697 10.0kb downstream 10.0kb downstream 16275 true scaffold_3: 34026510-34042784 Theobroma cacao
Thecc1EG016697 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 34032785-34042784 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041271 5273 Angiosperm View MSA
123818592 5264 Brassicales-Malvales Singleton cluster - no MSA
124314898 5266 SBM Singleton cluster - no MSA
124163854 5268 Malvidae Singleton cluster - no MSA
123887664 5270 Rosid Singleton cluster - no MSA
123751585 5271 Pentapetalae View MSA
122789418 5272 Eudicot View MSA
121344604 5274 Embryophyte View MSA
123428680 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain