Gene : Thecc1EG016688 T. cacao v1.1
Defline:  (1 of 1) PTHR21506 - COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6 Genomic Order:  3131
Name:  ? Thecc1EG016688 Secondary Identifier:  ? PAC:27450806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016688 0.5kb upstream 0.5kb upstream 5197 true scaffold_3: 33993467-33998663 Theobroma cacao
Thecc1EG016688 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33998164-33998663 Theobroma cacao
Thecc1EG016688 0.5kb downstream 0.5kb downstream 5197 true scaffold_3: 33992967-33998163 Theobroma cacao
Thecc1EG016688 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33992967-33993466 Theobroma cacao
Thecc1EG016688 1.0kb upstream 1.0kb upstream 5697 true scaffold_3: 33993467-33999163 Theobroma cacao
Thecc1EG016688 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33998164-33999163 Theobroma cacao
Thecc1EG016688 1.0kb downstream 1.0kb downstream 5697 true scaffold_3: 33992467-33998163 Theobroma cacao
Thecc1EG016688 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33992467-33993466 Theobroma cacao
Thecc1EG016688 2.0kb upstream 2.0kb upstream 6697 true scaffold_3: 33993467-34000163 Theobroma cacao
Thecc1EG016688 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33998164-34000163 Theobroma cacao
Thecc1EG016688 2.0kb downstream 2.0kb downstream 6697 true scaffold_3: 33991467-33998163 Theobroma cacao
Thecc1EG016688 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33991467-33993466 Theobroma cacao
Thecc1EG016688 5.0kb upstream 5.0kb upstream 9697 true scaffold_3: 33993467-34003163 Theobroma cacao
Thecc1EG016688 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33998164-34003163 Theobroma cacao
Thecc1EG016688 5.0kb downstream 5.0kb downstream 9697 true scaffold_3: 33988467-33998163 Theobroma cacao
Thecc1EG016688 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33988467-33993466 Theobroma cacao
Thecc1EG016688 10.0kb upstream 10.0kb upstream 14697 true scaffold_3: 33993467-34008163 Theobroma cacao
Thecc1EG016688 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33998164-34008163 Theobroma cacao
Thecc1EG016688 10.0kb downstream 10.0kb downstream 14697 true scaffold_3: 33983467-33998163 Theobroma cacao
Thecc1EG016688 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33983467-33993466 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830830 5264 Brassicales-Malvales View MSA
124342610 5266 SBM View MSA
124239435 5268 Malvidae View MSA
124064239 5270 Rosid View MSA
123740139 5271 Pentapetalae View MSA
122792773 5272 Eudicot View MSA
122046237 5273 Angiosperm View MSA
121346498 5274 Embryophyte View MSA
123424331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain