Gene : Thecc1EG016667 T. cacao v1.1
Defline:  (1 of 2) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Genomic Order:  3111
Name:  ? Thecc1EG016667 Secondary Identifier:  ? PAC:27447617
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016667 0.5kb upstream 0.5kb upstream 2508 true scaffold_3: 33895149-33897656 Theobroma cacao
Thecc1EG016667 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33895149-33895648 Theobroma cacao
Thecc1EG016667 0.5kb downstream 0.5kb downstream 2508 true scaffold_3: 33895649-33898156 Theobroma cacao
Thecc1EG016667 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33897657-33898156 Theobroma cacao
Thecc1EG016667 1.0kb upstream 1.0kb upstream 3008 true scaffold_3: 33894649-33897656 Theobroma cacao
Thecc1EG016667 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33894649-33895648 Theobroma cacao
Thecc1EG016667 1.0kb downstream 1.0kb downstream 3008 true scaffold_3: 33895649-33898656 Theobroma cacao
Thecc1EG016667 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33897657-33898656 Theobroma cacao
Thecc1EG016667 2.0kb upstream 2.0kb upstream 4008 true scaffold_3: 33893649-33897656 Theobroma cacao
Thecc1EG016667 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33893649-33895648 Theobroma cacao
Thecc1EG016667 2.0kb downstream 2.0kb downstream 4008 true scaffold_3: 33895649-33899656 Theobroma cacao
Thecc1EG016667 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33897657-33899656 Theobroma cacao
Thecc1EG016667 5.0kb upstream 5.0kb upstream 7008 true scaffold_3: 33890649-33897656 Theobroma cacao
Thecc1EG016667 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33890649-33895648 Theobroma cacao
Thecc1EG016667 5.0kb downstream 5.0kb downstream 7008 true scaffold_3: 33895649-33902656 Theobroma cacao
Thecc1EG016667 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33897657-33902656 Theobroma cacao
Thecc1EG016667 10.0kb upstream 10.0kb upstream 12008 true scaffold_3: 33885649-33897656 Theobroma cacao
Thecc1EG016667 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33885649-33895648 Theobroma cacao
Thecc1EG016667 10.0kb downstream 10.0kb downstream 12008 true scaffold_3: 33895649-33907656 Theobroma cacao
Thecc1EG016667 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33897657-33907656 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831222 5264 Brassicales-Malvales View MSA
124345665 5266 SBM View MSA
124239273 5268 Malvidae View MSA
124067911 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain