Gene : Thecc1EG016657 T. cacao v1.1
Defline:  (1 of 6) PF04819 - Family of unknown function (DUF716) (DUF716) Genomic Order:  3101
Name:  ? Thecc1EG016657 Secondary Identifier:  ? PAC:27447108
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016657 0.5kb upstream 0.5kb upstream 3886 true scaffold_3: 33847367-33851252 Theobroma cacao
Thecc1EG016657 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33847367-33847866 Theobroma cacao
Thecc1EG016657 0.5kb downstream 0.5kb downstream 3886 true scaffold_3: 33847867-33851752 Theobroma cacao
Thecc1EG016657 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33851253-33851752 Theobroma cacao
Thecc1EG016657 1.0kb upstream 1.0kb upstream 4386 true scaffold_3: 33846867-33851252 Theobroma cacao
Thecc1EG016657 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33846867-33847866 Theobroma cacao
Thecc1EG016657 1.0kb downstream 1.0kb downstream 4386 true scaffold_3: 33847867-33852252 Theobroma cacao
Thecc1EG016657 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33851253-33852252 Theobroma cacao
Thecc1EG016657 2.0kb upstream 2.0kb upstream 5386 true scaffold_3: 33845867-33851252 Theobroma cacao
Thecc1EG016657 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33845867-33847866 Theobroma cacao
Thecc1EG016657 2.0kb downstream 2.0kb downstream 5386 true scaffold_3: 33847867-33853252 Theobroma cacao
Thecc1EG016657 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33851253-33853252 Theobroma cacao
Thecc1EG016657 5.0kb upstream 5.0kb upstream 8386 true scaffold_3: 33842867-33851252 Theobroma cacao
Thecc1EG016657 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33842867-33847866 Theobroma cacao
Thecc1EG016657 5.0kb downstream 5.0kb downstream 8386 true scaffold_3: 33847867-33856252 Theobroma cacao
Thecc1EG016657 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33851253-33856252 Theobroma cacao
Thecc1EG016657 10.0kb upstream 10.0kb upstream 13386 true scaffold_3: 33837867-33851252 Theobroma cacao
Thecc1EG016657 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33837867-33847866 Theobroma cacao
Thecc1EG016657 10.0kb downstream 10.0kb downstream 13386 true scaffold_3: 33847867-33861252 Theobroma cacao
Thecc1EG016657 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33851253-33861252 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827562 5264 Brassicales-Malvales View MSA
124339757 5266 SBM View MSA
124250859 5268 Malvidae View MSA
124050453 5270 Rosid View MSA
123737519 5271 Pentapetalae View MSA
122787957 5272 Eudicot View MSA
122047488 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain